Part of scaffold_1366 (Scaffold)

For more information consult the page for scaffold_1366 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PPP6R1 ENSTTRG00000015674 (Bottlenosed dolphin)

Gene Details

protein phosphatase 6, regulatory subunit 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014850, Bottlenosed dolphin)

Protein Percentage 65.69%
cDNA percentage 67.13%
Ka/Ks Ratio 0.27808 (Ka = 0.0341, Ks = 0.1227)

BT.21710 ENSBTAG00000021157 (Cow)

Gene Details

serine/threonine-protein phosphatase 6 regulatory subunit 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000055919, Cow)

Protein Percentage 88.74%
cDNA percentage 90.28%
Ka/Ks Ratio 0.11152 (Ka = 0.052, Ks = 0.4666)

PPP6R1  (Minke Whale)

Gene Details

protein phosphatase 6, regulatory subunit 1

External Links

Gene match (Identifier: BACU009051, Minke Whale)

Protein Percentage 88.27%
cDNA percentage 90.87%
Ka/Ks Ratio 0.32856 (Ka = 0.0738, Ks = 0.2245)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2508 bp    Location:294294..307482   Strand:+
>bmy_16789
ATGTTTTGGAAGTTTGACCTGCACACGAGCTCGCACCTCGACACGCTGCTGGAGCGGGAGGACCTGAGCCTGCCTGAGCTGCTGGACGAGGAGGACGTGCTGCAGGAGTGCAAGGTCGTCAACCGAAAGCTGCTGGACTTTCTGCTGCAGCCGCCACACCTGCAGGCCATGGTGGCCTGGGTCACCCAGGAGCCGCCGGCCAGCGGCGAGGAGCGGCTGCGCTACAAGTACCCCAGCGTGGCCTGCGAGATCCTGACGTCGGACGTGCCCCAGATCAACGACGCGCTGGGTGCGGACGAGTCCCTCCTGCACCGGCTTTACGGCTTCCTGCAGAGCAGTGGCAGACTCAACCCGCTGCTGGCCAGCTTCTTCAGCAAGGTCATGGGCGTCCTCATCAACCGCAAGANNNNNNNNNNNNNNNGGGTGGGCGTGGGGCCGGCTCCTGCGCTGACGTGCCAGTCCCCGTGTCCCCAGCTCGTGTCCTTCCTGCGGAAGAAGGACGATTTTGTGGACCTGCTGCTGCAGCACATCGGCACCTCGGCCATCATGGACCTCCTGCTGCGCCTCCTCACCTGTGTGGAGCGGCCGCAGCTGAGGCAGGACGTGGTCAACGTGAGTGCCGAGGGGCCGCGGCGGGGCAGTGGGCAGGGCTGGGCGGCAGGAGCGGGGTCAGTGAGCGGAGCTCCACCTTCTCGCCCCCAGTGGCTCAATGAGGAGAAGATCGTCCAGCGGCTCATCGAGCAGATCCACCCATCGAAGGACGACAACCAACATTCCAACGCATCCCAGTCCCTGTGCGACATCATCCGCCTGAGCCGGGAGCAGGTGATCCACATGCAGGACAGCCCGGAGCCTGACCAGCTGTTGGCCACCCTGGAGAGGCAGGAGACGGTCGAGCAGCTGCTGAGCAACATGTTGGAGGGGGAGCAGAGCCAGTCCGTCATCGTGAGCGGGATCCAGGTGCTACTGACGCTGCTGGAGCCCAGGAGGCCCAGGTCCGAGTCTGTGATTGTGAACAACTTCTTCAGCAGCATGGATGGGCAGCTGGAGCTTCTGGCCCAGGCAACCCCGGACAGCGCCGTGTCCAGCGTGGGGACCCTGCATGCCCTGCGCCCACGGCTCAGCCGCTTCCACCAACTCCTGCTGGAGCCGCCCGAGCTAGAGCCGCTGCGCACGACATGGGGCAGCCTGGCCCCGCCGCTGGGCAACACGCGGTTGCACGTGGTCAAGCTGCTGGCCAGCGCCCTGAGCGCCAGCGATGCGGCCCTGACCCAGGAGCTCCTGGCGCTGGACGTGCCCAACACCCTTCTGGACCTCTTCTTCCACTATGTGTTCAACAATTTCTTGCACGCCCAAGTGGAGGTGTGTGTGAGCACGATGCTGAGCTCCGGGCCCCCTTCCAACAGCAGCTCTGACACACCCGCCCAGAACCCTGTCGTGAAACACGCCTTCATGGACTTCCAGATGCAGCGCATGACCTCAGCCTTCATCGACCACTTTGGCTTCAATGACGAGGAGTTTGGGGAGCAGGAGGAGAGCGTGAACGCGCCTTTCGACAAGACGGCCAACATCACCTTCTCCCTCAACGCCGACGACGACAACGTGAGTGCTGCCCCGACCCCTGCTGGTGGGGGCGGGCTGCAGGCAGTCAGCTCACCTCACACCCCCCTGCCCCCGCAGCCCAACGCCAACCTGCTTGAGATATGCTACAAGGACCGGATCCAGCAGTTCGATGACGAGGAGGAGGACGAGGAAGAGGGCCAGGGTTCGGGGGGGTCTGATGGAGAGGATGGTGCCTGGCAGGGCGGCCAGCTGGCCAGGGGGGCCCGCCTGGGCCAGCCCCCGGGTGTGCGGAGTGGAGGCAGCACAGACAGCGAGGAGGACGAGGACGACGACGAGGACGAGGACGACGAGGATGGTGACCGGCGGCTGGCCCGTGGCAGGGCTGGGCCCACCTCTCACCCCAGCCCTGGCCCCCAGCCTCCAGACCCCAGCTGGACAGCTACCTTTGACCCAGTGCCTGTGGATGCCCCGACCGGCCCCCAAGCCTGCAGGGAGAAGGAACTGCACTCTGGGCCCCCTGCCCCACAGGAGCCCCGCAGCGGGCCCCCGGACCTCCCTGCCCCGAGCCCAGCTGGCCCTGCGGCCCCCAGCACCCTGCAGCTCAGGTCTCAGGATCCCATCCCTTCCTCAGCACCTCAGGAAGCCACAGACGGCAGCAAAGTAGCGGAGCCCTCGGCCCCCTGCCAGGCCTTGGTCAGTGCTGGGGACCTCCAGGCCACCCTCAGAGGGACGCACCCCGCCCCCAGCTCCTTGGACAGTGCAACCAGAGACCCTGCTACCTCTGTCCCGGCCCCCAGGGCCCACCAGCCCCCCCAGACCACGGAGGGGGTGAAGAGCCCAGAGTCCTTGGGGCTCCCCCGAAGCCAGAGTGCCCTGGCCCTCGAGCCACTTCCGATGCCCAATGGCTCTGCCCCAGGAGGGCCGGCGTCCCCGGGCTCCCAGTGA

Related Sequences

bmy_16789T0 Protein

Length: 836 aa      View alignments
>bmy_16789T0
MFWKFDLHTSSHLDTLLEREDLSLPELLDEEDVLQECKVVNRKLLDFLLQPPHLQAMVAWVTQEPPASGEERLRYKYPSVACEILTSDVPQINDALGADESLLHRLYGFLQSSGRLNPLLASFFSKVMGVLINRKXXXXXXVGVGPAPALTCQSPCPQLVSFLRKKDDFVDLLLQHIGTSAIMDLLLRLLTCVERPQLRQDVVNVSAEGPRRGSGQGWAAGAGSVSGAPPSRPQWLNEEKIVQRLIEQIHPSKDDNQHSNASQSLCDIIRLSREQVIHMQDSPEPDQLLATLERQETVEQLLSNMLEGEQSQSVIVSGIQVLLTLLEPRRPRSESVIVNNFFSSMDGQLELLAQATPDSAVSSVGTLHALRPRLSRFHQLLLEPPELEPLRTTWGSLAPPLGNTRLHVVKLLASALSASDAALTQELLALDVPNTLLDLFFHYVFNNFLHAQVEVCVSTMLSSGPPSNSSSDTPAQNPVVKHAFMDFQMQRMTSAFIDHFGFNDEEFGEQEESVNAPFDKTANITFSLNADDDNVSAAPTPAGGGGLQAVSSPHTPLPPQPNANLLEICYKDRIQQFDDEEEDEEEGQGSGGSDGEDGAWQGGQLARGARLGQPPGVRSGGSTDSEEDEDDDEDEDDEDGDRRLARGRAGPTSHPSPGPQPPDPSWTATFDPVPVDAPTGPQACREKELHSGPPAPQEPRSGPPDLPAPSPAGPAAPSTLQLRSQDPIPSSAPQEATDGSKVAEPSAPCQALVSAGDLQATLRGTHPAPSSLDSATRDPATSVPAPRAHQPPQTTEGVKSPESLGLPRSQSALALEPLPMPNGSAPGGPASPGSQ*