Sequence detailsbmy_16798 (Coding sequence)

Part of scaffold_1366 (SequenceType object (1))

For more information consult the page for scaffold_1366 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PPP1R12CENSTTRG00000015656 (Bottlenosed dolphin)

Gene Details

protein phosphatase 1, regulatory subunit 12C

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000014834, Bottlenosed dolphin)

Protein Percentage 65.38%
cDNA percentage 67.07%
Ka/Ks Ratio 0.28101 (Ka = 0.068, Ks = 0.2421)

PPP1R12CENSBTAG00000017847 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000039370, Cow)

Protein Percentage 80.53%
cDNA percentage 81.05%
Ka/Ks Ratio 0.18305 (Ka = 0.1299, Ks = 0.7095)

PPP1R12C (Minke Whale)

Gene Details

protein phosphatase 1, regulatory subunit 12C

External Links

Gene match (Identifier: BACU009056, Minke Whale)

Protein Percentage 79.62%
cDNA percentage 84.49%
Ka/Ks Ratio 0.51538 (Ka = 0.1509, Ks = 0.2927)

Additional orthologs identified in other species via the OPTIC pipeline.

PPP1R12C (Human)   Ppp1r12c (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1725 bp    Location:369235..389598   Strand:+
Raw sequence 
>bmy_16798
ATGTCGGGCGAGGATGGCCCGGGGGCGGGCCCCGGGGCGGCGGCGGCAGCGGCCCGCGAGCGGCGGCGGGAGCAGCTGCGGCAGTGGGGGGCGCGGGCGGGCGCCGAGCCGGGCCCCGGGGAGCGGCGCGCCCGCACCGTGCGCTTCGAGCGCGCCGCCGAGTTCCTGGCGGCCTGCGCGGGCGGCGATCTGGACGAGGCGCGCCTGATGCTGCGCGAGGCCGACCCCGGCCCGGGCGCCGAGCTCGACCCTGCTGCCCCGCCGCCCGCCCGCGCAGTGCTGGACTCCACCAACGCCGACGGCATCAGCGCCCTGCACCAGGCCTGCATCGACGAGAACCTGGAGGTGGTGCGCTTCCTGGTGGAGCAGGGTGCCACGGTGAACCAGGCAGACAACGAGGGCTGGACACCCCTGCACGTGGCCGCCTCCTGTGGTTACCTGGACATCGCCAGGTACCTGCTGAGCCACGGGGCCAACATCGCCGCGGTGAACAGTGATGGGGACCTGCCCCTGGACCTGGCCGAGTCTGACGCCGTGGAGGGGCTGCTGAAGGGCGAAGGTGTGGATGTGGAAGCAGCCAAACGGGCCGAGGAGGAGTTGCTGCTTCACGACACAAGGTGCTGGCTGAACGGGGGCGCCATGCCAGAGGCCCGGCACCCCCGCACGGGGGCCTCTGCCCTGCACGTGGCCGCCGCCAAGGGCTACATCGAAGTGATGAGGCTGCTTCTTCAGGCCGGCTACGACCCGGAGCTGCGGGACGGGGACGGCTGGACGCCCCTGCACGCCGCAGCCCACTGGGGCGTGGAGGACGCCTGCCGCCTGCTGGCAGAGCACGGTGGGGGCATGGACTCGCTGACGCACGCGGGGCAGCGTCCCTGTGACCTGGCGGATGAGGAGGTGCTGAGCCTGCTGGAGGAGCTGGCCCGGAAGCAGGAGGACCTTCGGAACCAAAAGGAAGCCTCCCAGAGCAGGGGCCAGGAGCCCCAGGGGCCCTCCAGCAGCAAACACCGAAGGAGCTCTGTATGTCGTCTGAGCAGCCGTGAGAAGATCTCCCTCCAGGACCTGTCCAAGGAGCGCCGGCCTGGAGGGGCAGGGGGGCCCCCAATCCGGGATGAGGATGAGGGAGAAGAAGGCCCCTCAGAGCCACCCCCTGCAGAATCCAGAACCCTCAACGGGGTCTCCTCCCCACCACCCTCTAGCCCTAGGAGCCCCATGACCCCCGACGAGGCCCCCTTCTCCACGCGCTTTGGCCTCCAGAAGACGGGGAGCTCTGGGGCCCTAGGTCCTGCGGAGAGGCGGGGCGCCGAGGGTGCCCCCGGAGCTGGGCTGCAGCGCTCCGCCTCCTCCTCGCGGGTGGAAGGGACCTCCACTCAGGCCAGGGAGCCCCGTCTTGCCAGAATTACCCCCACCCCCTCCCGGACGGTGCCGGAGTCCTCTGCCCCGATTCCGGAGCCTGAATCCCCAGTGAAGCCAAATGTCCCCGTAGCCTCTGCAGCGCCCCCAGCGGACTCCCGGGACCGCCGGAGGTCCTACCAGATGCCTGTGCGGGATGAGGAGTCTGAATCTCAGCGGAAAGCTCGCTCTCGCCTCATGCGCCAGTCTCGGAGGTCCACACAGGTGTGGGATGGGGGACTGGACCCCTGGACCCCTGAGTCTGAGGGAGGAGGGCCTGGGGGCCTAGACTCTGTCCTGAAGGGGCTGGGCCCTGAGTCCTGGACCCCCTGA

Related Sequences

bmy_16798T0 SequenceType object (3)

Length: 575 aa      View alignments
>bmy_16798T0
MSGEDGPGAGPGAAAAAARERRREQLRQWGARAGAEPGPGERRARTVRFERAAEFLAACAGGDLDEARLMLREADPGPGAELDPAAPPPARAVLDSTNADGISALHQACIDENLEVVRFLVEQGATVNQADNEGWTPLHVAASCGYLDIARYLLSHGANIAAVNSDGDLPLDLAESDAVEGLLKGEGVDVEAAKRAEEELLLHDTRCWLNGGAMPEARHPRTGASALHVAAAKGYIEVMRLLLQAGYDPELRDGDGWTPLHAAAHWGVEDACRLLAEHGGGMDSLTHAGQRPCDLADEEVLSLLEELARKQEDLRNQKEASQSRGQEPQGPSSSKHRRSSVCRLSSREKISLQDLSKERRPGGAGGPPIRDEDEGEEGPSEPPPAESRTLNGVSSPPPSSPRSPMTPDEAPFSTRFGLQKTGSSGALGPAERRGAEGAPGAGLQRSASSSRVEGTSTQAREPRLARITPTPSRTVPESSAPIPEPESPVKPNVPVASAAPPADSRDRRRSYQMPVRDEESESQRKARSRLMRQSRRSTQVWDGGLDPWTPESEGGGPGGLDSVLKGLGPESWTP*