Part of scaffold_1366 (Scaffold)

For more information consult the page for scaffold_1366 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RDH13 ENSTTRG00000015611 (Bottlenosed dolphin)

Gene Details

retinol dehydrogenase 13 (all-trans/9-cis)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014793, Bottlenosed dolphin)

Protein Percentage 97.6%
cDNA percentage 97.5%
Ka/Ks Ratio 0.16626 (Ka = 0.0121, Ks = 0.0725)

RDH13 ENSBTAG00000030393 (Cow)

Gene Details

retinol dehydrogenase 13

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000029403, Cow)

Protein Percentage 92.81%
cDNA percentage 92.81%
Ka/Ks Ratio 0.13782 (Ka = 0.0349, Ks = 0.253)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1107 bp    Location:418581..432872   Strand:+
>bmy_16800
CTTCCCCACGTGAATCCCAGGCAGCGCGCTCCTAGGACCGACCCCGGGCGCGGGTCTGCGGGCGGCTGCAGTGGAACTCCCCCCGCCCCGCTCCGGCCCGGTATGAATCGCTACATTCTGCCGCTGTCCGTGCTGGGCACAGCGGTGGGTGGCGCCGTGCTGCTCAAGGACTTTGTCGCCGGCGGGGCTTGTCCTAGCAAGACCACCATTCCCGGGAAGACCGTCATTGTGACCGGCGCCAACACGGGCATCGGGAAACAGACCGCCTTGGAGCTGGCCAAAAGAGGAGGTACCATCATTCTGGCCTGTCGAGACTTGGAGAAGTGTGAGGCGGCAGCCAAGGAGATTCGAGGGGAGACCCTTAATCACCACGTCAACGCCCGGCATCTGGACTTGGCCTCCCTTAAGTCCATCCGAGAGTTTGCAGCGAAGATCATTGAAGAGGAGGAGCGAGTGCACATCCTGATCAATAACGCAGCCGTGATGCGGTGCCCCCACTGGACCACCGAGGACGGCTTTGAGATGCAGCTTGGCGTTAACTACCTGGGTCACTTTCTTTTGACGAATTTGCTGCTGGACAAGCTGAAAGCCTCTGCTCCTTCGCGCATCATCAACCTCTCGTCCTTGGCCCACGTTGCTGGGCACATAGACTTCGAGGACTTGAACTGGGAGAAGAGGAAGTATGACACTAAGGCAGCCTACTGCCAGAGCAAGCTGGCCGTTGTCCTCTTCACCAAGGAGCTGAGCCGGCGGCTGCAAGGCACGGGCGTGACTGTCAATGCCTTGCACCCCGGCGTGGCCAGGACAGAGCTGGGCAGACACACGGGCATGCACAGGTCCGCCTTCTCCAGCTTCACGCTCGGGCCCATCTTCTGGCTGCTGGTCAAGAGCCCCCAGCTGGCGGCCCAGCCCAGCACCTACCTGGCCGTGGCGGAGGAGTTGGAGGGCGTTTCTGGAAAGTACTTTGAGGGACTCAAAGAGAAGGCTCCGGCCCCGGAAGCTGAGGATGAGGAGGTAGCCCAGAGGCTTTGGGCTGAAAGTGCCCGCCTTGTGGGCTTGGAGATGTCCTATGGATCCTCTGAGAGGGGACAGCCCCTCCCCAAATAA

Related Sequences

bmy_16800T0 Protein

Length: 369 aa      View alignments
>bmy_16800T0
LPHVNPRQRAPRTDPGRGSAGGCSGTPPAPLRPGMNRYILPLSVLGTAVGGAVLLKDFVAGGACPSKTTIPGKTVIVTGANTGIGKQTALELAKRGGTIILACRDLEKCEAAAKEIRGETLNHHVNARHLDLASLKSIREFAAKIIEEEERVHILINNAAVMRCPHWTTEDGFEMQLGVNYLGHFLLTNLLLDKLKASAPSRIINLSSLAHVAGHIDFEDLNWEKRKYDTKAAYCQSKLAVVLFTKELSRRLQGTGVTVNALHPGVARTELGRHTGMHRSAFSSFTLGPIFWLLVKSPQLAAQPSTYLAVAEELEGVSGKYFEGLKEKAPAPEAEDEEVAQRLWAESARLVGLEMSYGSSERGQPLPK*