Part of scaffold_1398 (Scaffold)

For more information consult the page for scaffold_1398 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000016952 (Bottlenosed dolphin)

Gene Details

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016071, Bottlenosed dolphin)

Protein Percentage 92.21%
cDNA percentage 94.66%
Ka/Ks Ratio 0.65323 (Ka = 0.0502, Ks = 0.0768)

ALG10 ENSBTAG00000030632 (Cow)

Gene Details

dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000040876, Cow)

Protein Percentage 97.68%
cDNA percentage 95.5%
Ka/Ks Ratio 0.07218 (Ka = 0.011, Ks = 0.1526)

ALG10  (Minke Whale)

Gene Details

ALG10, alpha-1,2-glucosyltransferase

External Links

Gene match (Identifier: BACU020512, Minke Whale)

Protein Percentage 98.95%
cDNA percentage 99.44%
Ka/Ks Ratio 0.91391 (Ka = 0.0056, Ks = 0.0061)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1554 bp    Location:43961..39263   Strand:-
>bmy_16807
ATGCTCAGTTCCCTCCGGCTAGTCCCTCCTTGCGCGCCCATTTCGAGCCCGAATGTCAAGCTCGACTTTGGGGACTTGAGAATCCCGCACATATTTTCCAGGACTAGATTCTTGGCTATGCGGGCAGGAATGGCGCAGCTGGAGGGTTACTATTTCTCGGCAGCCCTGAGCTGTACCTTTTTAGTGTCCTGCCTCCTTTTCTCTGCTTTCAGCCGGGCGCTGCGAGAGCCCTACATGGACGAGATCTTCCACCTGCCGCAGGCACAGCGCTACTGTGAGGGCCATTTCTCCCTCTCGCAGTGGGACCCCATGATTACTACATTACCTGGCTTATACCTGCTGTCAGTTGGAGTGGTCAAACCTGCCAGTTGGATCTTTGGATGGTCGGAACACGTTGTCTGCTCCATTGGAATGCTCAGATTTGTTAATCTTCTCTTCAGTGTTGGCAACTTCTATTTACTATATTTGCTTCTCCGCAAGGTGCAACCCAGGCACAAGGCTGCCTCAAGTATCCAGAGAATCTTGTCAACATTAACATTAGCAGTATTTCCCACACTCTATTTTTTTAACTTCCTTTATTATACAGAAGCAGGATCCATGTTTTTTACTCTTTTTGCCTACTTGATGTGTCTTTATGGAAATCATAAAACTTCAGCCTTGCTTGGATTTTGTGGCTTCATGTTTCGTCAAACAAATATCATCTGGGCTATCTTCTGCGCAGGAAACGTCATTGCACAAAAGTTGACTGAAGCTTGGAAAACCGAGCTACAAAAGAAGAAAGAAGAGAGGCTTTCCTCTATTAAAGGACCATTTTCAGAATTCAGGAAAATTCTTCAGTTCCTTTTGGCTTATTCCATGTCCTTTAAGAACTTGAGTATGCTTTTCCTTTTGACTTGGCCCTACATCCTTCTAATGTTTCTGTTTTGTGCTTTTGTGGTAGTTAATGGTGGAATTGTTATTGGTGACCGGAGTAGTCATGAAGCCTGCCTACACTTTCCTCAGCTATTCTACTTTTTCTCTTTTACTCTCTTTTTTTCCTTTCCTCACCTACTGTCTCTTAAGAAAATCAGGTCTTTTCTTTGCTTAGTTTGGAAACGGAGAATTCAGTTTTTTGTGATTACTTTAGTCTCCATATTTTTAGTTTGGAAATTTACTTACGCTCATAAATACTTGCTAGCAGATAATAGACATTATACATTCTATGTGTGGAAAAGAGTTTTTCAAAGATATGAAATTGTGAAATATTTGTTAGTTCCAGTTTATATATTTGCCGGTTGGAGTATCGCTGACTCATTGAAATCAAAGTCGATATTCTGGAATTTAATGTTTTTCATATGCTTATTCACCGTTATAGTACCTCAGAAACTGCTAGAATTTCGTTACTTCATTTTACCCTATGTTATTTATAGGCTTAACATACCTCTGCCACCTACATCCAGACTTGTTTGTGAGCTGGGTTGCTATGCAGTTGTGAATTTCCTAACTTTTTATATCTTTCTGAATAAGACTTTTCAGTGGCCAAATAGTCAGGACATTCAGAGGTTTATGTGGTAA

Related Sequences

bmy_16807T0 Protein

Length: 518 aa      View alignments
>bmy_16807T0
MLSSLRLVPPCAPISSPNVKLDFGDLRIPHIFSRTRFLAMRAGMAQLEGYYFSAALSCTFLVSCLLFSAFSRALREPYMDEIFHLPQAQRYCEGHFSLSQWDPMITTLPGLYLLSVGVVKPASWIFGWSEHVVCSIGMLRFVNLLFSVGNFYLLYLLLRKVQPRHKAASSIQRILSTLTLAVFPTLYFFNFLYYTEAGSMFFTLFAYLMCLYGNHKTSALLGFCGFMFRQTNIIWAIFCAGNVIAQKLTEAWKTELQKKKEERLSSIKGPFSEFRKILQFLLAYSMSFKNLSMLFLLTWPYILLMFLFCAFVVVNGGIVIGDRSSHEACLHFPQLFYFFSFTLFFSFPHLLSLKKIRSFLCLVWKRRIQFFVITLVSIFLVWKFTYAHKYLLADNRHYTFYVWKRVFQRYEIVKYLLVPVYIFAGWSIADSLKSKSIFWNLMFFICLFTVIVPQKLLEFRYFILPYVIYRLNIPLPPTSRLVCELGCYAVVNFLTFYIFLNKTFQWPNSQDIQRFMW*