Part of scaffold_1398 (Scaffold)

For more information consult the page for scaffold_1398 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SYT10 ENSTTRG00000015406 (Bottlenosed dolphin)

Gene Details

synaptotagmin X

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014601, Bottlenosed dolphin)

Protein Percentage 76.7%
cDNA percentage 78.25%
Ka/Ks Ratio 0.81927 (Ka = 0.075, Ks = 0.0916)

SYT10 ENSBTAG00000000606 (Cow)

Gene Details

synaptotagmin-10

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000798, Cow)

Protein Percentage 88.54%
cDNA percentage 90.23%
Ka/Ks Ratio 0.38828 (Ka = 0.0782, Ks = 0.2015)

SYT10  (Minke Whale)

Gene Details

synaptotagmin X

External Links

Gene match (Identifier: BACU006088, Minke Whale)

Protein Percentage 86.5%
cDNA percentage 89.53%
Ka/Ks Ratio 0.99305 (Ka = 0.115, Ks = 0.1159)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1548 bp    Location:453246..528678   Strand:+
>bmy_16809
ATGAGTTTCCAAAAGGAGGACGGAGTGAGCAGCCTGTGCCAGAAGGCGCTGCACATCGTCACCGAGCTGTGCTTCGCGGGCCAGGTGGAGTGGGAGAAATGCTCGAGCATCTTCCCCCCGGACAGGGGCAGCCAGGGCGGAAGTAGCGCAGTTGATACTGTGGATAAAACTACTGATTTCCACCACTACCCCACCACCACCCCTTGTGATCATACACCGAATAGTGGTTTCCTGGGTCTCAAATTGATTGATAATGAGGAAAATTTGAAGAGCATGTCAAGTGCTCCCACTGAAGTTTTTGAGACTGAAGAGAAAAAAGAGGTTAAAGAAAATGGAGAACCAGCACTGAAAGCTATTGAGCCTGCAATAAAAATCAGCCACACTTCCCCTGATATCCCAGCAGAAGTCCAAACTGCTTTAACAGAACATTTAATTAAACATGCACGTGTGCAAAGACAAACTACTGAGCCTACATCTTCATCCCGACACAATTCCTTCAGAAGACACCTACCAAGGCAAATGCAGGTTTCCAGTGTTGATTTTGGCATGGGCACAGAACCCATTTTACAAAGAGGAGAAACAACAACCAGCATTGGGAGAATAAAACCAGAGCTCTACAAACAGAAATCAGTTGACTCTGAGGGCAACAAGAAAGAAGATGTCAAAACCTGTGGGAATCTTAACTTCACCCTCCAGTATGATTATGAAAATGAACTTCTAGTTGTTAAAATTATCAAAGCCTTAGATCTCCCTGCTAAAGACTTCACAGGAACTTCTGACCCTTATGTGAAGATGTATCTTCTTCCAGATAGGAAAAAGAAATTTCAGACCCGTGTGCACAGAAAAACTTTAAATCCTGTGTTTGATGAAACTTTTCAGTTTCCTGTAGCATATGATCAACTAAGCAACCGAAAACTACATTTCGGTGTGTATGATTTTGACAGATTTTCTAGACATGACATGATTGGGGAAGTGATTTTTGATAATTTGTTTGAAGCCTCTGATCTCTCCAGGGAAGCCACAGTATGGAAAGATATTCATTGTGCTACCACAGAAAGTATAGACCTGGGTGAAATCATGTTTTCCCTTTGTTATTTGCCAACTGCTGGACGTGTGACATTGACAGTCATCAAGTGCAGAAATCTGAAAGCTATGGATATCACCGGCTCATCAGATCCTTATGTCAAAGTGTCTCTGATGTGTGAGGGTCGAAGATTAAAAAAGAGGAAAACGACTACAAAGAAAAACACTCTAAACCCTGTGTACAATGAGGCCATTATTTTTGATATCCCTCCGGAGAATGTGGACCAGGTCAGCCTCTCCATTGCAGTCATGGATTATGACAGGGTAGGACACAATGAAGTCATAGGAGTGTGTAGAACAGGACTGGACGCTGAGGGTCTTGGGCGAGACCACTGGAATGAAATGCTGGCCTATCACCGAAAACCAATAACACATTGGCACCCCTTGCTGGAGTTACCTGGCCGGGCAACTAGTTTTGACAGTCAAGGATCCTGTGCATCTCCCAAACCACCTTCCACACCATAA

Related Sequences

bmy_16809T0 Protein

Length: 516 aa      View alignments
>bmy_16809T0
MSFQKEDGVSSLCQKALHIVTELCFAGQVEWEKCSSIFPPDRGSQGGSSAVDTVDKTTDFHHYPTTTPCDHTPNSGFLGLKLIDNEENLKSMSSAPTEVFETEEKKEVKENGEPALKAIEPAIKISHTSPDIPAEVQTALTEHLIKHARVQRQTTEPTSSSRHNSFRRHLPRQMQVSSVDFGMGTEPILQRGETTTSIGRIKPELYKQKSVDSEGNKKEDVKTCGNLNFTLQYDYENELLVVKIIKALDLPAKDFTGTSDPYVKMYLLPDRKKKFQTRVHRKTLNPVFDETFQFPVAYDQLSNRKLHFGVYDFDRFSRHDMIGEVIFDNLFEASDLSREATVWKDIHCATTESIDLGEIMFSLCYLPTAGRVTLTVIKCRNLKAMDITGSSDPYVKVSLMCEGRRLKKRKTTTKKNTLNPVYNEAIIFDIPPENVDQVSLSIAVMDYDRVGHNEVIGVCRTGLDAEGLGRDHWNEMLAYHRKPITHWHPLLELPGRATSFDSQGSCASPKPPSTP*