Part of scaffold_1406 (Scaffold)

For more information consult the page for scaffold_1406 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DCPS ENSTTRG00000001560 (Bottlenosed dolphin)

Gene Details

decapping enzyme, scavenger

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001470, Bottlenosed dolphin)

Protein Percentage 55.22%
cDNA percentage 56.23%
Ka/Ks Ratio 0.28451 (Ka = 0.0752, Ks = 0.2642)

DCPS ENSBTAG00000002879 (Cow)

Gene Details

scavenger mRNA-decapping enzyme DcpS

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003732, Cow)

Protein Percentage 86.52%
cDNA percentage 85.51%
Ka/Ks Ratio 0.10202 (Ka = 0.0784, Ks = 0.7682)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 693 bp    Location:7998..30225   Strand:+
>bmy_16810
ATGACCTCACTGGGGAGAAGTCGGCAGCAGCGCTGGAAAGCAGGCTTGTTTGAACACGTGAAGACAACCGTGGTTTACCCTGCCACAGAGAAACACCTTCAAAAGTACCTGCACCGGGACCTCCGCCTGGTCCGGGAGACAGGCGATGACTACAAGAACGTCACCTTACCGCACCTGGAGTCCCAGAGCCTCAGCATCCAGTGGGTGTACAATATTCTCGACAGGAAGGCTGAAGCTGAGCGGATTGTTTTTGAGAATCCAGATCCCTCTGACGGCTTTGTCCTCATCCCCGACCTCAAGTGGAACCAACAGCAGCTCGATGACCTGTACCTGATTGCCATCTGCCATCGCCGGGACATCAAGTCGCTTCGGGACCTCACCCCAGAGCACCTGCCACTGCTCAGGAACATCCTCCAGGAGGGGCAGGAAGCCATCCTGCAGCGCTACCAGGTGGCGGGAGACCGCCTTCGCGTGTACCTGCACTACCTGCCCTCCTACTACCACCTGCACGTGCACTTCACCGCCCTGGGCTTCGAGGCCCCTGGTGCAGGCGTGGAGCGGGCCCACCTGCTGGCGGAGGTGATCGAGAACCTGGAGCAGGACCCCGAGCACTACGGCCGCCGCACCCTCACCTTTGCCCTCAGAGCTGATGACCCCCTCCTCGCGCTCTTGCAGGAGGCCCAGAGAAGCTGA

Related Sequences

bmy_16810T0 Protein

Length: 231 aa      View alignments
>bmy_16810T0
MTSLGRSRQQRWKAGLFEHVKTTVVYPATEKHLQKYLHRDLRLVRETGDDYKNVTLPHLESQSLSIQWVYNILDRKAEAERIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRDIKSLRDLTPEHLPLLRNILQEGQEAILQRYQVAGDRLRVYLHYLPSYYHLHVHFTALGFEAPGAGVERAHLLAEVIENLEQDPEHYGRRTLTFALRADDPLLALLQEAQRS*