Part of scaffold_1394 (Scaffold)

For more information consult the page for scaffold_1394 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HTR1B ENSBTAG00000037429 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053759, Cow)

Protein Percentage 91.75%
cDNA percentage 91.84%
Ka/Ks Ratio 0.0942 (Ka = 0.0342, Ks = 0.363)

HTR1B  (Minke Whale)

Gene Details

5-hydroxytryptamine (serotonin) receptor 1B, G protein-coupled

External Links

Gene match (Identifier: BACU002036, Minke Whale)

Protein Percentage 99.49%
cDNA percentage 99.4%
Ka/Ks Ratio 0.21849 (Ka = 0.0032, Ks = 0.0145)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1173 bp    Location:512883..514055   Strand:+
>bmy_16816
ATGGAGGAAGCGGGCGCTCAGTGCGCCCCGCCGCTGTCCGTGAGCTCCCAGACCGGGCTCTCTCCAGCCAACCTCTCTGCCGCTCCCTCCCACAACTGCAGCGCCGAGGGCTACATTTACCAGGACTCCGTAGCCCTGCCCTGGAAGGTAGTACTGGTCATGCTGCTGGCGCTCTTCACCTTGGCCACCACGCTCTCCAACGCGTTTGTGATCGCCACTGTGTACCGGACGCGGAAGCTGCATACCCCCGCCAACTACCTGATCGCCTCCCTGGCGGTCACCGACCTGCTGGTATCCATCCTGGTGATGCCCATCAGCACCATGTACACGGTCACGGGCCGCTGGACGCTGGGCCAGGCGGTGTGCGACTTCTGGCTGTCATCGGACATCACCTGTTGCACCGCTTCCATCTTGCACCTCTGTGTCATCGCCCTGGACCGCTACTGGGCGATCACGGACGCCGTGGAGTACTCGGCTAAAAGGACTCCCAAGAGGGCGGCGGTCATGATCGCGCTCGTGTGGGTCTTCTCCATCTCCATCTCGCTGCCGCCCTTCTTCTGGCGTCAGGCCAAAGCCGAGGAGGAGGTGTCGGACTGCGTGGTGAACACGGATCACATCCTCTACACTGTCTACTCCACGGTGGGCGCCTTCTACTTCCCCACCCTGCTCCTCATCGCCCTCTATGGCCGCATCTATGTGGAAGCCCGCTCCCGGATTTTGAAACAGACGCCCAACAGAACCGGCAAGCGTCTGACCCGAGCCCAGCTGGTTACTGACTCCCCCGGGTCCACGTCTTCGGTCACCTCCATTAATTCGAGGGCTCCAGACTTACCCAGCGAATCGGGGTCTCCTGTGTACGTGAACCAAGTCAAAGTGCGAGTCTCCGACGCCCTGCTGGAGAAGAAGAAACTCATGGCCGCTAGGGAGCGCAAAGCCACCAAGACCCTGGGGATCATTTTGGGAGCGTTCATTGTGTGTTGGCTGCCCTTCTTCATCATCTCCCTGGTGATGCCTATCTGCAAGGATGCCTGCTGGTTCCACCTGGCCATCTTTGACTTCTTCACGTGGCTGGGCTATCTCAACTCCCTCATCAACCCCATCATCTATACCATGTCCAACGAGGACTTCAAACAGGCGTTCCATAAACTGATACGCCTTAAGTGCACAAGYTGA

Related Sequences

bmy_16816T0 Protein

Length: 391 aa      View alignments
>bmy_16816T0
MEEAGAQCAPPLSVSSQTGLSPANLSAAPSHNCSAEGYIYQDSVALPWKVVLVMLLALFTLATTLSNAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVTGRWTLGQAVCDFWLSSDITCCTASILHLCVIALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFSISISLPPFFWRQAKAEEEVSDCVVNTDHILYTVYSTVGAFYFPTLLLIALYGRIYVEARSRILKQTPNRTGKRLTRAQLVTDSPGSTSSVTSINSRAPDLPSESGSPVYVNQVKVRVSDALLEKKKLMAARERKATKTLGIILGAFIVCWLPFFIISLVMPICKDACWFHLAIFDFFTWLGYLNSLINPIIYTMSNEDFKQAFHKLIRLKCTS*