Sequence detailsbmy_16824 (Coding sequence)

Part of scaffold_1365 (SequenceType object (1))

For more information consult the page for scaffold_1365 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ELAVL3ENSTTRG00000001789 (Bottlenosed dolphin)

Gene Details

ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000001687, Bottlenosed dolphin)

Protein Percentage 97.78%
cDNA percentage 97.31%
Ka/Ks Ratio 0.18914 (Ka = 0.0169, Ks = 0.0895)

ELAVL3ENSBTAG00000014412 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000019169, Cow)

Protein Percentage 96.39%
cDNA percentage 92.96%
Ka/Ks Ratio 0.06245 (Ka = 0.0249, Ks = 0.398)

ELAVL3 (Minke Whale)

Gene Details

ELAV like neuron-specific RNA binding protein 3

External Links

Gene match (Identifier: BACU002472, Minke Whale)

Protein Percentage 97.73%
cDNA percentage 97.63%
Ka/Ks Ratio 0.26644 (Ka = 0.0174, Ks = 0.0653)

Additional orthologs identified in other species via the OPTIC pipeline.

ELAVL3 (Human)   Elavl3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1146 bp    Location:169578..186346   Strand:+
Raw sequence 
>bmy_16824
ATGGTCACTCAGATACTCGGGGCCATGGAGTCTCAGGTGGCGGGGGGCCCGGCTGGCCCGGCCCTGCCCAACGGGCCACTCCTTGGTACAAACGGAGCCAGTGATGACAGCAAGACCAACCTCATCGTCAACTACCTGCCCCAGAACATGACCCAGGATGAGTTCAAGAGTCTCTTCGGCAGCATTGGTGACATTGAGTCCTGCAAGTTGGTTCGGGACAAGATCACAGGGCAGAGCCTCGGCTACGGGTTTGTGAACTACTCTGACCCCAACGATGCAGACAAAGCCATCAACACCCTCAACGGCCTCAAACTGCAGACGAAGACCATCAAGGTGTCCTATGCCAGGCCCAGCTCCGCCTCCATCCGGGATGCGAACCTGTACGTCAGCGGGCTCCCCAAGACCATGAGCCAGAAAGAGATGGAGCAGCTCTTCTCCCAGTACGGCCGCATCATCACTTCTCGCATCCTGGTGGACCAGGTCACAGGTGTCTCTCGGGGTGTGGGATTCATCCGCTTTGACAAGAGGATCGAGGCCGAGGAGGCTATCAAAGGACTGAACGGGCAGAAGCCGCTGGGTGCGGCCGAGCCCATCACGGTCAAGTTTGCCAACAACCCGAGTCAGAAGACCGGGCAGGCCCTGCTCACTCACCTCTACCAGTCCTCCGCCAGGCGCTACGCAGGCCCGCTGCACCATCAGACACAGCGCTTCCGGCTGGACAATTTGCTCAACATGGCCTACGGAGTCAAGAGGTTCTCACCCATCGCCATCGACGGCATGAGCGGCCTCGCGGGCGTGGGCCTGTCGGGGGGCGCGGCGGGCGCTGGCTGGTGCATCTTCGTGTACAACCTGTCTCCGGAGGCGGATGAGAGTGTGCTGTGGCAGCTGTTCGGGCCCTTCGGGGCAGTCACCAATGTCAAGGTCATCCGCGACTTTACCACCAACAAGTGCAAGGGCTTTGGCTTCGTCACCATGACCAACTATGACGAGGCGGCCATGGCCATCGCCAGCCTCAACGGCTACCGCCTGGGCGAGCGCGTGCTGCAGTGGGCCCAGTCAGAACTGAGAATGGCGAACCCCGATTTTAGCCTCAGTGCCCTTTCTGTGGTGTCCCTGCGTTTGGTGTCTGGCCATGGCCCCATCTGA

Related Sequences

bmy_16824T0 SequenceType object (3)

Length: 382 aa      View alignments
>bmy_16824T0
MVTQILGAMESQVAGGPAGPALPNGPLLGTNGASDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQWAQSELRMANPDFSLSALSVVSLRLVSGHGPI*