Sequence detailsbmy_16832 (Coding sequence)

Part of scaffold_1365 (SequenceType object (1))

For more information consult the page for scaffold_1365 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RAB3DENSTTRG00000001764 (Bottlenosed dolphin)

Gene Details

RAB3D, member RAS oncogene family

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000001662, Bottlenosed dolphin)

Protein Percentage 99.36%
cDNA percentage 98.09%
Ka/Ks Ratio 0.02779 (Ka = 0.0027, Ks = 0.0962)

BT.20052ENSBTAG00000002148 (Cow)

Gene Details

ras-related protein Rab-3D

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000002783, Cow)

Protein Percentage 98.73%
cDNA percentage 95.12%
Ka/Ks Ratio 0.01582 (Ka = 0.0053, Ks = 0.3381)

Additional orthologs identified in other species via the OPTIC pipeline.

RAB3D (Human)   Rab3d (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 471 bp    Location:263162..264463   Strand:+
Raw sequence 
>bmy_16832
ATGGCGTCAGCTGGAGATCCCCCGACGGGCCAGCGGGATGCAGCGGACCAGAACTTCGACTACATGTTCAAGCTGCTGCTCATCGGCAACAGCAGCGTGGGCAAGACGTCCTTTCTGTTCCGATACGCCGACGACTCCTTCACGCCCGCCTTTGTCAGCACTGTGGGCATCGACTTCAAGGTCAAGACCGTCTACCGCCACGACAAGAGGATCAAGCTGCAGATCTGGGACACGGCAGGCCAGGAGCGCTACCGTACAATCACCACAGCCTACTACCGCGGAGCCATGGGCTTYCTGCTCATGTATGACGTCACCAACCAGGAGTCCTTTGCCGCCGTACAGGACTGGGCCACGCAGATCAAGACCTACTCCTGGGACAACGCTCAGGTCATCCTCGTGGGGAACAAGTGTGACCTGGAGGACGAGCGTGTCGTGCCCACTGAGGAAGGCCAGAGGCTCGCTGACGACCTT

Related Sequences

bmy_16832T0 SequenceType object (3)

Length: 157 aa      View alignments
>bmy_16832T0
MASAGDPPTGQRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDVTNQESFAAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPTEEGQRLADDL