Sequence details bmy_16833 (Coding sequence)

Part of scaffold_1365 (Scaffold)

For more information consult the page for scaffold_1365 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TSPAN16 ENSTTRG00000001756 (Bottlenosed dolphin)

Gene Details

tetraspanin 16

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001656, Bottlenosed dolphin)

Protein Percentage 48.72%
cDNA percentage 52.56%
Ka/Ks Ratio 0.44847 (Ka = 0.1474, Ks = 0.3286)

TSPAN16 ENSBTAG00000032293 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000043153, Cow)

Protein Percentage 76.28%
cDNA percentage 83.55%
Ka/Ks Ratio 0.34325 (Ka = 0.1383, Ks = 0.4028)

TSPAN16  (Minke Whale)

Gene Details

tetraspanin 16

External Links

Gene match (Identifier: BACU002479, Minke Whale)

Protein Percentage 93.28%
cDNA percentage 96.92%
Ka/Ks Ratio 1.58028 (Ka = 0.036, Ks = 0.0228)

Additional orthologs identified in other species via the OPTIC pipeline.

TSPAN16 (Human)  

Genome Location

Sequence Coding sequence

Length: 468 bp    Location:291234..282988   Strand:-
Raw sequence 
>bmy_16833
ATGTTTTCTGTTCTAAAGCTCTCTGGCGTGATCCTCAACGGCCTGGGCATCTATGTCAGTTTCAGAGGGGCTGTTCTGATGGTCCTCGGCCTGTCCTCTGCATACCTGTTTCACGTTGGCTACCTGTGCCTGGTGATGGGCTGCATCACAGTGCTGCTTGGCTTTGCTGGGTGGCACAGAGCAACCAAAGAAAGCCGAGGCACCCTCTTGTTTTGTTTCTCGGTCATGGTCATCATTCTCATCGTGGAAATCATTGTCGCCACAGTGGTCCTTGCCTTCTTCCCGATTGGAGTCTTCAAGTGTTTATTCTCTTCTCTGCAGCTAAAGTGCTGTGGCATGAAGAACTACACAGATTTTCCATCCTTCGAAAGGATGACTGGCCACACCTACCCCAGGGGCTGCTATAAATCCATCGGGACCGTGGCCTGCGACGGGCACAACGTGTTTGCAGATGTCATCCACCAGGAG

Related Sequences

bmy_16833T0 Protein

Length: 156 aa      View alignments
>bmy_16833T0
MFSVLKLSGVILNGLGIYVSFRGAVLMVLGLSSAYLFHVGYLCLVMGCITVLLGFAGWHRATKESRGTLLFCFSVMVIILIVEIIVATVVLAFFPIGVFKCLFSSLQLKCCGMKNYTDFPSFERMTGHTYPRGCYKSIGTVACDGHNVFADVIHQE