Sequence detailsbmy_16837 (Coding sequence)

Part of scaffold_1365 (SequenceType object (1))

For more information consult the page for scaffold_1365 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SPC24ENSTTRG00000009517 (Bottlenosed dolphin)

Gene Details

SPC24, NDC80 kinetochore complex component

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000009017, Bottlenosed dolphin)

Protein Percentage 62.84%
cDNA percentage 70.72%
Ka/Ks Ratio 0.38956 (Ka = 0.3062, Ks = 0.7859)

BT.67115ENSBTAG00000006185 (Cow)

Gene Details

kinetochore protein Spc24

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000008128, Cow)

Protein Percentage 62.84%
cDNA percentage 66.22%
Ka/Ks Ratio 0.21861 (Ka = 0.3137, Ks = 1.4351)

SPC24 (Minke Whale)

Gene Details

SPC24, NDC80 kinetochore complex component

External Links

Gene match (Identifier: BACU002481, Minke Whale)

Protein Percentage 68.92%
cDNA percentage 71.4%
Ka/Ks Ratio 0.30918 (Ka = 0.2814, Ks = 0.9103)

Genome Location

Sequence SequenceType object (2)

Length: 447 bp    Location:397283..398989   Strand:+
Raw sequence 
>bmy_16837
ATGGGGGCATTGAGGCCGCCCTCTGCTCCGGGGCTCTCCTGGGGAGCCCGAGTTGAGGGGCGCAGACTTCTCCCTGCCCTGCAGAGGTCCTCACTGCGGAGAAGGAGGTGGCCCAGAGCCTCCTCAACGCGAAGGAGCAGGCACACCAGGGCGGCGTTGAGTTGCAGCAGCTTGAAGCCGAGCTTCAGAGGGCCAGCGAGGAAGACGCCCCTCAGCAGAGAGCTGGAGGAGCTCAAGGAGATCGAGGCTGATCTCGAAAGACAAGAGAGGGAGGTTGACGAAGACACGACAGTCACCATCCCTTCAGCCGTGTATGTGGCTCAACTTTATCGCCGAATTATCCATCATGGCCCCAGCGTTGCTCAGCCCATCCACCTGGAGAGCACCCAGCTCTCCAAGAAATTCATCAGCGACTATCTCTGGAGCTTGGTGGACACGGAGTGGTAG

Related Sequences

bmy_16837T0 SequenceType object (3)

Length: 149 aa      View alignments
>bmy_16837T0
MGALRPPSAPGLSWGARVEGRRLLPALQRSSLRRRRWPRASSTRRSRHTRAALSCSSLKPSFRGPARKTPLSRELEELKEIEADLERQEREVDEDTTVTIPSAVYVAQLYRRIIHHGPSVAQPIHLESTQLSKKFISDYLWSLVDTEW*