Sequence details bmy_16839 (Coding sequence)

Part of scaffold_1365 (Scaffold)

For more information consult the page for scaffold_1365 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SMARCA4 ENSTTRG00000009519 (Bottlenosed dolphin)

Gene Details

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009020, Bottlenosed dolphin)

Protein Percentage 98.24%
cDNA percentage 97.09%
Ka/Ks Ratio 0.01442 (Ka = 0.0012, Ks = 0.0811)

bta-mir-2882 ENSBTAG00000019220 (Cow)

Gene Details

bta-mir-2882

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025598, Cow)

Protein Percentage 99.43%
cDNA percentage 94.16%
Ka/Ks Ratio 0.00587 (Ka = 0.0023, Ks = 0.3995)

SMARCA4  (Minke Whale)

Gene Details

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4

External Links

Gene match (Identifier: BACU002483, Minke Whale)

Protein Percentage 99.79%
cDNA percentage 99.11%
Ka/Ks Ratio 0.01832 (Ka = 0.0009, Ks = 0.0473)

Additional orthologs identified in other species via the OPTIC pipeline.

SMARCA4 (Human)   Smarca4 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 4257 bp    Location:531643..472764   Strand:-
Raw sequence 
>bmy_16839
ATGTCCACTCCAGACCCACCCCTGGGCGGAACTCCTCGGCCAGGCCCTTCCCCGGGCCCGGGCCCCTCCCCTGGAGCCATGTTGGGCCCTAGCCCAGGTCCCTCACCCGGCTCCGCCCACAGCATGATGGGGCCCAGCCCAGGGCCTCCCTCAGCAGGACACCCCATCCCGACCCAGGGGCCTGGAGGGTACCCTCAGGACAACATGCACCAGATGCACAAGCCAATGGAGTCCATGCACGAGAAGGGCATGTCGGACGACCCCCGCTACAACCAGATGAAGGGGATGGGGATGCGGTCGGGGGGCCACGCCGGGATGGGGCCCCCGCCAAGCCCCATGGACCAGCACTCCCAAGGTTACCCCTCGCCCCTGGGTGGCTCCGAGCACGCCTCCAGTCCGGTTCCAGCCAGCGGCCCGTCCTCGGGCCCGCAGATGTCGTCCGGGCCTGGAGGCGCCCCGCTGGATGGTGCTGACCCCCAGGCTTTGGGGCAGCAGAACCGGGGCCCGACCCCCTTTAACCAGAACCAGCTGCACCAGCTCAGAGCTCAGATCATGGCCTACAAGATGCTGGCCCGGGGGCAGCCCCTCCCTGACCACCTGCAGATGGCAGTGCAGGGGAAGCGGCCGATGCCCGGGATGCAGCAGCAGATGCCAACACTACCTCCACCCTCTGTGTCCGCAACAGGACCTGGCCCCGGGCCCGGGCCAGGCCCCGGTCCTGGACCAGCACCTCCAAACTACAGCAGGCCTCACGGTATGGGAGGACCCAACATGCCCCCTCCAGGACCCTCAGGCGTGCCCCCCGGGATGCCCGGCCAGCCCCCCGGAGGGCCTCCCAAGCCCTGGCCTGAAGGACCCATGGCGAATGCTGCTGCCCCCACAAGCACACCTCAGAAGCTGATCCCCCCGCAGCCAACGGGTCGCCCCTCGCCTGCGCCCCCCGCCGTCCCTCCTGCTGCCTCCCCCGTGATGCCGCCCCAGACACAGTCGCCGGGGCAGCCGGCCCAGCCCGCCCCCATGGTGCCGCTCCACCAGAAGCAGAGCCGCATCACCCCCATCCAGAAGCCGCGGGGCCTGGACCCCGTGGAGATCCTGCAGGAGCGGGAGTACAGGCTGCAGGCTCGCATCGCACACCGAATTCAGGAACTTGAAAACCTTCCCGGGTCCCTGGCCGGGGATTTGCGAACCAAAGCGACCATCGAGCTCAAGGCCCTGAGGCTGCTGAACTTCCAGAGGCAGCTGCGGCAGGAGGTGGTGGTATGCATGAGGAGGGACACGGCCCTCGAGACGGCCCTCAACGCCAAGGCCTACAAGCGCAGTAAGCGGCAGTCCCTGCGCGAGGCCCGCATCACCGAGAAGCTGGAGAAGCAGCAGAAGATAGAGCAGGAGCGCAAGCGCCGGCAGAAGCACCAGGAATACCTCAACAGCATTCTTCAGCACGCCAAGGATTTCAAAGAATATCACAGGTCGGTCACAGGCAAAATCCAGAAACTCACGAAGGCGGTGGCCACATACCACGCCAACACTGAGCGGGAACAGAAGAAGGAGAATGAAAGAATCGAGAAGGAGAGAATGCGGAGGCTCATGGCCGAGGACGAGGAAGGGTACCGCAAGCTCATCGACCAGAAGAAGGACAAGCGCCTGGCCTACCTCCTGCAGCAGACGGACGAGTACGTGGCTAACCTCACGGAGCTGGTGCGGCAGCACAAGGCCGCCCAGGTCGCCAAGGAGAAGAAGAAGAAGAAGAAAAAGAAGAAGGCAGAAAACGCTGAAGGACAGACACCTGCAATCGGACCCGATGGCGAGCCTCTGGATGAGACCAGCCAAATGAGCGACCTTCCGGTGAAAGTGATCCACGTGGAGAGTGGGAAGATCCTCACGGGCACAGACGCACCCAAAGCAGGGCAGCTGGAGGCCTGGCTGGAAATGAACCCGGGGTATGAAGTAGCTCCAAGATCTGATAGTGAAGAGAGTGGCTCAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGCAGCCGCAGCCAGCACAGCCTCCCGCCCTGCCCGTGGAGGAGAAGAAGAAGATTCCGGATCCAGACAGCGACGACGTCTCCGAGGTGGACGCCCGGCACATCATTGAGAACGCCAAGCAAGATGTTGATGATGAGTATGGCGTGTCGCAGGCCCTCGCTCGTGGCCTGCAGTCCTATTATGCCGTGGCCCACGCCGTCACCGAGAGGGTGGATAAACAGTCGGCGCTCATGGTCAATGGCGTCCTCAAGCAGTACCAGATCAAAGGCTTAGAGTGGCTGGTGTCCCTGTACAACAACAACCTGAATGGCATCCTGGCTGATGAGATGGGCCTGGGGAAGACCATCCAGACCATCGCTCTCATCACGTACCTCATGGAGCACAAGCGGATCAACGGGCCCTTCCTCATCATAGTACCTCTCTCAACGCTGTCCAACTGGGCATACGAATTTGACAAGTGGGCCCCCTCGGTGGTGAAGGTGTCCTACAAGGGCTCTCCAGCAGCCAGACGTGCTTTCGTCCCCCAGCTCCGGAGCGGCAAGTTCAACGTCTTGCTGACGACGTACGAGTACATCATTAAAGACAAGCACATCCTTGCAAAGATCCGTTGGAAGTACATGATCGTGGACGAAGGCCACCGCATGAAGAACCACCACTGCAAGCTGACGCAGGTCCTCAACACGCACTACGTGGCCCCGCGCCGCCTGCTGCTGACGGGCACGCCCCTGCAGAACAAGCTCCCTGAACTCTGGGCGCTGCTCAACTTCCTGCTGCCCACCATCTTCAAGAGCTGCAGCACCTTCGAGCAGTGGTTCAACGCGCCCTTCGCCATGACCGGCGAAAAGGTGGACCTGAACGAGGAGGAAACCATTCTCATCATCCGTCGTCTCCACAAAGTGGAGTACGTCATCAAGTGCGACATGTCCGCGCTGCAGCGCGTGCTTTACCGGCACATGCAGGCCAAGGGGGTGCTGCTCACCGATGGCTCTGAGAAGGATAAGAAGGGCAAAGGTGGCACCAAGACCCTGATGAACACCATCATGCAGCTGAGGAAGATCTGCAACCACCCGTACATGTTCCAGCACATCGAGGAGTCCTTTTCCGAGCACCTTGGGTTTACCGGTGGCATCGTCCAAGGGCTGGACCTGTACCGAGCCTCGGGGAAATTCGAGCTGCTCGATAGAATTCTTCCCAAACTCCGGGCCACCAACCATAAAGTGCTGCTGTTCTGTCAGATGACCTCCCTCATGACGATCATGGAAGACTATTTTGCGTATCGCGGCTTTAAATACCTCAGGCTCGATGGAACCACGAAAGCGGAGGACCGGGGCATGCTGCTGAAGACCTTCAACGAGCCCGGCTCCGAGTACTTCATCTTCCTGCTCAGCACCCGGGCTGGGGGGCTGGGTCTGAACCTCCAGTCAGCCGACACTGTGATCATATTCGACAGTGACTGGAACCCCCACCAGGACCTGCAAGCGCAGGACCGTGCCCACCGCATCGGGCAGCAGAACGAGGTCCGCGTGCTCCGCCTCTGCACGGTCAACAGCGTGGAAGAGAAGATCCTGGCCGCGGCCAAGTACAAGCTCAACGTCGACCAGAAGGTGATCCAGGCCGGCATGTTCGACCAGAAGTCCTCCAGCCACGAGAGGCGCGCTTTCCTCCAGGCCATCCTGGAGCACGAGGAGCAGGACGAGGAAGAAGACGAGGTGCCTGACGACGAGACGGTGAACCAGATGATTGCCCGGCACGAGGAAGAGTTCGACCTGTTCATGCGCATGGACCTGGACCGCAGGCGCGAGGAGGCCCGCAACCCCAAGCGGAAGCCACGCCTGATGGAGGAGGATGAGCTCCCCTCGTGGATCATCAAGGACGATGCAGAGGTGGAGCGGCTGACCTGCGAGGAGGAGGAGGAGAAGATGTTCGGCCGCGGCTCCCGCCACCGCAAGGAGGTGGACTACAGCGACTCGCTGACGGAGAAGCAGTGGCTCAAGGCCATCGAGGAGGGCACGCTGGAGGAGATCGAAGAGGAGGTCCGGCAGAAGAAATCGTCGCGGAAGCGCAAGCGGGACAGCGATGCCGGCCCCTCCACCCCGACCACCAGCACCCGCAGCCGCGACAAGGACGATGAGAGCAAGAAGCAGAAGAAGCGTGGCCGGCCGCCTGCCGAGAAGCTCTCCCCCAACCCGCCCAACCTCACCAAGAAGATGAAGAAGATCGTGGACGCTGTGATCAAGTACAAGGACAGG

Related Sequences

bmy_16839T0 Protein

Length: 1419 aa      View alignments
>bmy_16839T0
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPPALPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGPSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDR