Part of scaffold_1397 (Scaffold)

For more information consult the page for scaffold_1397 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ST6GALNAC5 ENSTTRG00000014394 (Bottlenosed dolphin)

Gene Details

ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013643, Bottlenosed dolphin)

Protein Percentage 93.64%
cDNA percentage 92.29%
Ka/Ks Ratio 0.02978 (Ka = 0.0049, Ks = 0.1642)

ST6GALNAC5 ENSBTAG00000007309 (Cow)

Gene Details

alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009616, Cow)

Protein Percentage 90.23%
cDNA percentage 90.61%
Ka/Ks Ratio 0.1184 (Ka = 0.0556, Ks = 0.4697)

ST6GALNAC5  (Minke Whale)

Gene Details

ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5

External Links

Gene match (Identifier: BACU014785, Minke Whale)

Protein Percentage 98.15%
cDNA percentage 98.56%
Ka/Ks Ratio 0.22186 (Ka = 0.01, Ks = 0.0449)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 525 bp    Location:225359..217946   Strand:-
>bmy_16841
ATGGGGTCCTTCTCCCCCTCCTTGCAGCCCCTGAAAATGCACTGCAGGGACTGCGCCCTGGTGACGAGCTCGGGGCATCTGCTGCGTAGCCTGCGAGGCCCCCGGATTGACCAGACCGAGTGCGTCATCCGCATGAACGACGCCCCTACGCGCGGCTACGGGCACGACGTGGGCAATCGCACCAGCCTGAGGGTCATCGCGCATTCCAGCCTCCAGCGAATCCTCCGCAACCGCCACGACCTGCTCAACGTCAGCCAGGGCACCGTGTTCATCTTCTGGGGCCCCAGCAGCTACATGCGGCGCGACGGCAAGGGCCGGGTCTACAACAACCTGCAGCTCCTAAGCCAGGTGCTGCCCCGGCTGAAGGCCTTCATGATCACGCGCCACAAGATGCTGCAGTTTGACGAGCTCTTCAAGCGCGAGACCGGCAAAGACAGCACTGGCTGGTTCACAATGACCATTGCCCTGGAGCTCTGTGACAGGATCAGTGTTTATGGCATGGTGCCCCCAGACTTCTGCAGGTAG

Related Sequences

bmy_16841T0 Protein

Length: 175 aa      View alignments
>bmy_16841T0
MGSFSPSLQPLKMHCRDCALVTSSGHLLRSLRGPRIDQTECVIRMNDAPTRGYGHDVGNRTSLRVIAHSSLQRILRNRHDLLNVSQGTVFIFWGPSSYMRRDGKGRVYNNLQLLSQVLPRLKAFMITRHKMLQFDELFKRETGKDSTGWFTMTIALELCDRISVYGMVPPDFCR*