Sequence details bmy_16845 (Coding sequence)

Part of scaffold_1371 (Scaffold)

For more information consult the page for scaffold_1371 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TOP2B ENSTTRG00000010918 (Bottlenosed dolphin)

Gene Details

topoisomerase (DNA) II beta 180kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010365, Bottlenosed dolphin)

Protein Percentage 98.66%
cDNA percentage 98.38%
Ka/Ks Ratio 0.18699 (Ka = 0.0077, Ks = 0.0414)

BT.105991 ENSBTAG00000004593 (Cow)

Gene Details

DNA topoisomerase 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000006030, Cow)

Protein Percentage 97.3%
cDNA percentage 94.2%
Ka/Ks Ratio 0.05505 (Ka = 0.0127, Ks = 0.2301)

Additional orthologs identified in other species via the OPTIC pipeline.

TOP2B (Human)   Top2b (Mouse)  

Genome Location

Sequence Coding sequence

Length: 4704 bp    Location:329570..273570   Strand:-
Raw sequence 
>bmy_16845
GAAGTATTCTTGATAAAGACTCTTTTTGATCAGAACAATGCTGCAAAAAAAGAAGAGTCAGAAACTGCAAACAAAAATGATTCTTCAAAGAAGTTGTCTGTCGAGAGAGTGTATCAGAAAAAGACACAACTTGAACATATTCTCCTTCGTCCTGATACGTACATTGGGTCGGTGGAGCCATTGACACAGCTCATGTGGGTGTATGATGAAGACGTAGGAATGAATTGCAGAGAGGTTACCTTTGTGCCGGGTTTATACAAGATCTTTGATGAAATTTTGGTTAATGCAGCTGACAATAAACAGAGGGATAAGAACATGACCTGTATTAAAGTTTCTATTGATCCTGAATCTAACATTATAAGCATCTGGAATAATGGGAAAGGCATTCCGGTAGTAGAACACAAAGTAGAGAAAGTTTATGTTCCTGCATTAATTTTTGGACAGCTTTTAACATCCAGTAACTATGACGATGATGAGAAAAAAGTAACAGGTGGTCGCAATGGTTATGGTGCAAAACTTTGTAATATTTTCAGTACAAAGTTTACAGTAGAAACTGCTTGCAAAGAATACAAACATAGTTTTAAGCAGACATGGATGAATAATATGATGAAGACTTCTGAAGCCAAAATTAAACATTTTGATGGTGAAGATTACACATGCATAACATTCCAACCAGATCTGTCCAAGTTTAAGATGGAGAAACTTGACAAGGACATTGTGGCTCTCATGACCAGAAGAGCTTACGATTTGGCTGGTTCATGCAAAGGAGTCAAGGTAAATGGATTTCGCAGTTATGTAGATCTTTATGTGAAAGACAAGTTGGATGAAACTGGAGTGGCCCTAAAAGTTATTCATGAACTTGCAAATGAAAGATGGGATGTTTGTCTCACACTGAGTGAAAAAGGATTCCAGCAAATCAGCTTTGTAAATAGCATTGCAACAACAAAAGGTGGACGGCATGTGGATTATGTAGTAGACCAAGTTGTTGGTAAACTGATTGAAGTAGTTAAGAAAAAGAACAAAGCTGGTGTGTCAGTGAAACCATTTCAAGTAAAAAACCATATATGGATTTTTATTAACTGCCTTATCGAAAATCCAACTTTTGATTCTCAGACTAAGGAAAACATGACTTTGCAGCCCAAAAGTTTTGGATCCAAATGCCAACTGTCAGAAAAGTTTTTTAAAGCAGCCTCTAACTGTGGCATTGTGGAAAGTATCCTGAACTGGGTGAAATTTAAGGCTCAGACGCAGCTGAACAAGAAGTGTTCATCAGTAAAGTACAGTAAAATCAAAGGTATTCCCAAACTGGATGATGCTAATGATGCTGGTGGCAGGCACTCCCTGGAGTGCACGCTGATACTGACGGAAGGGGACTCTGCTAAGTCGCTGGCCGTGTCCGGACTGGGCGTGATTGGGAGGGACAGGTACGGGGTCTTCCCCCTCAGGGGCAAGATCCTCAACGTGCGGGAGGCCTCTCACAAGCAGATCATGGAGAATGCAGAAATAAACAATATCATTAAGATAGTTGGTCTACAATACAAGAAGAGTTACGATGATGCAGAATCGCTGAAAACCTTACGCTATGGGAAGATTATGATTATGACTGATCAGGATCAAGATGGTTCTCACATAAAAGGCCTGCTTATTAATTTCATCCATCACAATTGGCCATCACTTTTGAAGCATGGTTTTCTTGAAGAGTTCATTACGCCTATTGTAAAGGCTAGCAAAAATAAGCAGGAACTTTCCTTCTATAGTATTCCTGAATTTGATGAGTGGAAAAAACATATAGAAAACCAGAAAGCATGGAAAATAAAATACTACAAAGATGATGCTGCCATTACCTTGGCATTCAGTAAGAAGAAGATCGATGACAGAAAAGAATGGTTAACAAATTTTATGGAAGATCGGAGACAGCGTAGGTTACATGGCTTACCAGAGCAATTTTTATATGGTACAGCAACAAAGCATTTGACTTACAATGATTTCATCAACAAGGAATTGATTCTCTTCTCAAACTCAGACAATGAAAGATCTATACCATCTCTTGTTGATGGCTTTAAACCAGGCCAACGAAAAGTTTTATTTACCTGTTTCAAGAGGAATGATAAACGCGAAGTAAAAGTTGCACAGTTGGCTGGATCTGTTGCCGAGATGTCTGCTTATCATCATGGAGAACAAGCACTGATGATGACTATCGTGAACTTGGCTCAGAACTTTGTGGGGAGTAACAACATTAACTTGCTTCAGCCCATCGGTCAGTTTGGAACTCGGCTTCACGGGGGCAAAGACGCTGCAAGTCCTCGTTACATTTTCACAATGTTAAGCTCTTTAGCAAGACTGCTTTTCCCTGCTGTGGACGACAACCTGCTTAAATTCCTTTATGATGATAATCAACGCGTAGAGCCTGAGTGGTATATTCCCATAATCCCCATGGTTTTAATAAATGGTGCTGAGGGCATCGGCACAGGATGGGCTTGTAAACTACCCAACTATGATGCTAGGGAGATTGTGAACAACGTCAGACGGATGCTGGAAGGCTTGGATCCTCATCCCATGCTTCCAAACTACAAGAACTTTAAAGGAACAATCCAAGAACTTGGTCAAAACCAATATGCAGTCAGTGGTGAAATATTTGTGGTGGATAGAAACACAGTGGAGATTACAGAGCTTCCCGTTAGAACTTGGACACAGGTATACAAAGAACAGGTTTTAGAACCTATGCTAAATGGAACAGATAAAACACCAGCATTAATTTCTGATTATAAAGAATATCATACTGATACAACTGTGAAATTTGTGGTGAAAATGACTGAAGAGAAACTGGCACAAGCAGAAGCTGCTGGATTGCACAAAGTTTTTAAGCTGCAAACTACTCTTACCTGTAATTCCATGGTACTCTTTGACCATATGGGATGTCTGAAGAAGTATGAAACTGTGCAAGACATTTTGAAAGAATTCTTTGATTTACGATTAAGCTATTATGGTTTACGTAAGGAGTGGCTTGTAGGAATGCTGGGAGCAGAATCTACAAAGCTTAACAATCAAGCCCGTTTCATTTTAGAGAAGATACAAGGGAAGATTACTATAGAGAATAGGTCAAAGAAAGATTTGATTCAAATGTTAGTCCAGAGAGGTTATGAATCTGACCCAGTGAAAGCCTGGAAAGAAGCACAAGAAAAGGCAGCAGAAGAGGAAGAAACACAAAACCAGCATGATGATAGTTCCTCTGATTCAGGAACTCCTTCAGGCCCTGATTTTAATTATATTTTAAATATGTCTCTATGGTCTCTTACTAAAGAAAAAGTTGAAGAACTGATTAAACAGAGAGATGCAAAAGGGCGAGAGGTCGGTGATCTTAAAAGAAAATCTCCTTCAGATCTTTGGAAAGAAGATTTAGCAGCTTTTGTTGAAGAACTGGATAAAGTGGAAGGGCAAGAACGAGAAGATGTTATGACTGGGATGGCTGGAAAAGCAATAAAAGGGAAAGTTGGCAAACCTAAGGTGAAGAAGCTTCAACTGGAAGAGACAATGCCCTCGCCTTTCGGGAGAAGAATAGTTCCTGAAATTACTGCCATGAAGGCAGATGCCAGTAAGAAGTTGCTGAAGAAGAAAAAGGGTGATCTCGATACCACAGCAGTGAAAGTGGAATTTGATGAAGAATTCAGCGGAGCACAGGTAGAAGTTGCGGGAGAAGAGGCATTGATCCCGTCAGCGCCTGTAAACAAAGGTCCCAAACCCAAAAGGGAGAGAAAGGAGCCTGGTACCAGGGTGAGAAAAGCGCCTACATCATCTGGTAAACCCAGCGCAAAGAAAGTGAAGAAACGGAATCCTTGGTCAGACGATGAATCCAAGTCAGAAAGTGACTTGGAAGAAACAGAACCTGTGGTTATTCCACGAGATTCTTTACTTAGGAGAGCGGCTGCTGAAAGGCCTAAGTACACATTTGATTTCTCAGAAGAAGAGGAYGATGATGCCGATGATGACGATGACAATAATGATTTAGAGGAATTGAAAGTTAAAGCATCTCCCATAACAAATGATGGAGAAGATGAATTTGTCCCTTCAGATGGCCTAGATAAAGATGAATACACGTTTTCACCAGGCAAATCCAAAGCTAGTCCAGAAAAGTCTTCCCATGACAAAAAAGGTCAGGATTACGGGGCTCTCTTCTCATTCCCTTCATACTCTCAGAAGTCAGAAGACGATTCAGCTAAATTTGACAGTAATGAAGAAGATTCTGCTTCTGTCTTTTCACCATCATTTGGTCTGAAACAAACAGAAAAAGTTCCAAGTAAAACAGTAGCTGCTAAAAAGGGAAAACCATCTTTAGATACAGCCCCTAAGCCCAAGAGAACCCCCAAACAGAAGAAAGTAGAGACTGTAAACTCTGACTCGGACTCCGAATTTGGCGTTCCAAAGAAGACAACAGCACCCAAAGGTAAAGGCCGAGGGGCAAAGAAGAGGAAAGCATCTGGCTCTGAAAACGAAGGTGATTATAACCCTGGCAGGAAAACCTCTAAAACAACAAGCAAGAAACCGAAGAAAACATCTTTCGATCAGGATTCAGATGTGGACATCTTCCCACCAGACTTCACTTCTGAACCACCTTCTCTGCCACGGACCGGTCGGGCTAGGAAAGAAGTAAAATATTTTGCAGAGTCTGATGAAGAAGAAGATGTCGATTTTGCGATGTTTAATTAG

Related Sequences

bmy_16845T0 Protein

Length: 1568 aa      View alignments
>bmy_16845T0
EVFLIKTLFDQNNAAKKEESETANKNDSSKKLSVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDVGMNCREVTFVPGLYKIFDEILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKIKHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSCKGVKVNGFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRHVDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWIFINCLIENPTFDSQTKENMTLQPKSFGSKCQLSEKFFKAASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDANDAGGRHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQDQDGSHIKGLLINFIHHNWPSLLKHGFLEEFITPIVKASKNKQELSFYSIPEFDEWKKHIENQKAWKIKYYKDDAAITLAFSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLARLLFPAVDDNLLKFLYDDNQRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLEGLDPHPMLPNYKNFKGTIQELGQNQYAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDKTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEETQNQHDDSSSDSGTPSGPDFNYILNMSLWSLTKEKVEELIKQRDAKGREVGDLKRKSPSDLWKEDLAAFVEELDKVEGQEREDVMTGMAGKAIKGKVGKPKVKKLQLEETMPSPFGRRIVPEITAMKADASKKLLKKKKGDLDTTAVKVEFDEEFSGAQVEVAGEEALIPSAPVNKGPKPKRERKEPGTRVRKAPTSSGKPSAKKVKKRNPWSDDESKSESDLEETEPVVIPRDSLLRRAAAERPKYTFDFSEEEDDDADDDDDNNDLEELKVKASPITNDGEDEFVPSDGLDKDEYTFSPGKSKASPEKSSHDKKGQDYGALFSFPSYSQKSEDDSAKFDSNEEDSASVFSPSFGLKQTEKVPSKTVAAKKGKPSLDTAPKPKRTPKQKKVETVNSDSDSEFGVPKKTTAPKGKGRGAKKRKASGSENEGDYNPGRKTSKTTSKKPKKTSFDQDSDVDIFPPDFTSEPPSLPRTGRARKEVKYFAESDEEEDVDFAMFN*