Part of scaffold_1388 (Scaffold)

For more information consult the page for scaffold_1388 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FGFR1 ENSTTRG00000004544 (Bottlenosed dolphin)

Gene Details

fibroblast growth factor receptor 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004280, Bottlenosed dolphin)

Protein Percentage 86.8%
cDNA percentage 86.84%
Ka/Ks Ratio 0.24354 (Ka = 0.0458, Ks = 0.188)

FGFR1 ENSBTAG00000015457 (Cow)

Gene Details

fibroblast growth factor receptor 1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020550, Cow)

Protein Percentage 93.38%
cDNA percentage 90.11%
Ka/Ks Ratio 0.09202 (Ka = 0.0424, Ks = 0.461)

FGFR1  (Minke Whale)

Gene Details

fibroblast growth factor receptor 1

External Links

Gene match (Identifier: BACU007426, Minke Whale)

Protein Percentage 93.55%
cDNA percentage 94.1%
Ka/Ks Ratio 0.27566 (Ka = 0.043, Ks = 0.1559)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2547 bp    Location:265831..280350   Strand:+
>bmy_16849
ATGGGGGCTGCTGGGTTTGTGGCAAGGGGGCTTGTTCAACAGTTCCGAGGGAAAGGGCTCCATAGCCCCTGGGATGCTGCAGCTCAGTGCGGCTGGCATAATGCCCTTTGTCTTTCCCCCCTCCTCCCCGCCCCTCGCTTCCTCTTCCCGGCCCCTGTGGCGGCAGCAGCCCAGCCCTGGGGAGCCCCCGTGGAAGTGGAGTCCCTCCTGGTCCACCCCGGTGACCTGCTGCAGCTCCGCTGTCGGCTGCGGGACGATGTACAGAGCATCAACTGGCTGCGGGACGGGGTGCAGCTGGTGGAAAGCAACCGCACCCGCATCACGGGGGAGGAGGTGGAGGTGCGGGGTTCCGTGCCCGCCGACTCCGGCCTCTACGCCTGTGTGACCAGCAGCCCCTCGGGCAGCGATACCACCTACTTCTCCGTCAACGTCTCAGATGCTCTCCCCTCCTCGGAGGACGATGATGATGATGATGACTCCTCTTCAGAGGAGAAAGAGACAGATAACACCAAACCAAACCGTATGCCCGTGGCTCCGTACTGGACGTCGCCAGAAAAGATGGAAAAGAAACTGCACGCGGTGCCAGCTGCCAAGACAGTGAAGTTCAAATGCCCTTCCAGTGGGACCCCTAACCCCACGCTGCGCTGGCTGAAAAATGGCAAAGAATTCAAGCCTGACCACAGGATCGGAGGCTACAAGGTCCGTTACGCCACCTGGAGCATCATAATGGACTCCGTGGTGCCTTCTGATAAGGGCAACTACACCTGCGTCGTGGAGAACGAGTACGGCAGCATCAACCACACCTACCAGCTCGATGTCGTGGAGCGGTCCCCTCACCGGCCCATCCTGCAGGCAGGGTTGCCAGCCAACAAGACAGTGGCCCTGGGCAGCAATGTGGAGTTCATGTGTAAGGTGTACAGCGACCCGCAGCCCCATATCCAGTGGCTAAAGCACATCGAGGTGAATGGGAGTAAGATTGGTCCGGACAACCTGCCTTATGTCCAGATCTTGAAGCATTCGGGGATAAATAGCTCGGATGCGGAGGTGCTGACCCTGTTCAATGTGACAGAGGCCCAGAGCGGGGAGTATGTGTGTAAGGTTTCCAATTATATTGGTGAAGCTAACCAGTCTGCGTGGCTCACAGTCACCAGACCTGTGGCAAAAGCCCTGGAAGAAAGACCGGCGGTGATGACCTCGCCCCTGTACCTGGAGATCATCATCTATTGCACGGGGGCCTTCCTCATCTCCTGCATGGTGGGGTCTGTCATCATCTATAAGATGAAGAGCGGCACCAAGAAGAGTGACTTCCACAGCCAGATGGCCGTACACAAGCTGGCCAAGAGCATCCCTCTGCGCAGACAGGTGTCGGCCGACTCCAGCGCATCCATGAACTCTGGGGTCCTGCTGGTTCGGCCCTCGCGTCTCTCCTCCAGCGGGACCCCCATGCTGGCTGGGGTCTCTGAATACGAGCTTCCCGAAGACCCTCGCTGGGAGCTGCCTCGGGACAGACTGGTTTTAGGCAAACCCCTGGGAGAGGGCTGCTTTGGGCAGGTGGTGTTGGCGGAGGCCATTGGGCTGGACAAGGACAAACCCAACCGGGTGACCAAAGTGGCTGTGAAGATGCTGAAGTCGGATGCAACAGAGAAAGACCTGTCGGACCTGATCTCCGAAATGGAGATGATGAAGATGATCGGGAAGCACAAGAATATCATCAACCTGCTGGGGGCCTGCACGCAGGACGGCCCCCTGTATGTCATCGTGGAGTATGCCTCCAAGGGCAACCTCCGAGAGTACCTGCAGGCCCGGAGGCCGCCGGGGCTGGAGTACTGCTACAACCCCAGCCGTCATCCCGAGGAGCAGCTGTCCTCCAAGGACCTGGTTTCCTGCGCCTATCAGGTGGCCCGAGGCATGGAGTATCTCGCCTCCAAGAAGTGCATACACCGAGACCTGGCCGCCAGGAACGTGCTGGTGACGGAGGACAACGTGATGAAGATCGCAGACTTTGGCCTCGCTCGTGACATCCACCACATTGACTACTATAAAAAGACGACCAACGGCCGACTGCCTGTCAAGTGGATGGCACCCGAGGCCTTGTTTGACCGGATCTACACCCACCAGAGCGACGTGTGGTCTTTTGGGGTGCTTCTGTGGGAAATCTTCACTCTGGGCGGCTCCCCRTACCCTGGCGTCCCTGTGGAGGAGCTTTTCAAGCTGCTGAAGGAGGGTCATCGTATGGACAAGCCCAGTAACTGCACCAATGAGCTGTACATGATGATGCGAGACTGCTGGCACGCGGTACCCTCTCAAAGACCTACCTTCAAGCAGCTGGTGGAAGACCTGGACCGCATCGTGGCCTTGACCTCCAATCAGGAGTACCTGGACCTATCAATGCCCCTGGACCAGTACTCCCCCAGCTTCCCCGACACCCGCAGCTCTACCTGCTCCTCTGGGGAGGATTCCGTCTTCTCTCACGAGCCCTTGCCCGAGGAGCCCTGTCTGCCCCGACACCCGGCCCAGCTGGCCAATGGCGGACTCAAACGGCGCTGA

Related Sequences

bmy_16849T0 Protein

Length: 849 aa      View alignments
>bmy_16849T0
MGAAGFVARGLVQQFRGKGLHSPWDAAAQCGWHNALCLSPLLPAPRFLFPAPVAAAAQPWGAPVEVESLLVHPGDLLQLRCRLRDDVQSINWLRDGVQLVESNRTRITGEEVEVRGSVPADSGLYACVTSSPSGSDTTYFSVNVSDALPSSEDDDDDDDSSSEEKETDNTKPNRMPVAPYWTSPEKMEKKLHAVPAAKTVKFKCPSSGTPNPTLRWLKNGKEFKPDHRIGGYKVRYATWSIIMDSVVPSDKGNYTCVVENEYGSINHTYQLDVVERSPHRPILQAGLPANKTVALGSNVEFMCKVYSDPQPHIQWLKHIEVNGSKIGPDNLPYVQILKHSGINSSDAEVLTLFNVTEAQSGEYVCKVSNYIGEANQSAWLTVTRPVAKALEERPAVMTSPLYLEIIIYCTGAFLISCMVGSVIIYKMKSGTKKSDFHSQMAVHKLAKSIPLRRQVSADSSASMNSGVLLVRPSRLSSSGTPMLAGVSEYELPEDPRWELPRDRLVLGKPLGEGCFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSRHPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEYLDLSMPLDQYSPSFPDTRSSTCSSGEDSVFSHEPLPEEPCLPRHPAQLANGGLKRR*