Sequence detailsbmy_16854 (Coding sequence)

Part of scaffold_1388 (SequenceType object (1))

For more information consult the page for scaffold_1388 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

WHSC1L1ENSTTRG00000004519 (Bottlenosed dolphin)

Gene Details

Wolf-Hirschhorn syndrome candidate 1-like 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004261, Bottlenosed dolphin)

Protein Percentage 93.72%
cDNA percentage 93.66%
Ka/Ks Ratio 0.35007 (Ka = 0.0231, Ks = 0.066)

BT.88726ENSBTAG00000001529 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000053526, Cow)

Protein Percentage 91.88%
cDNA percentage 89.02%
Ka/Ks Ratio 0.13265 (Ka = 0.0516, Ks = 0.3888)

Additional orthologs identified in other species via the OPTIC pipeline.

WHSC1L1 (Human)  

Genome Location

Sequence SequenceType object (2)

Length: 3135 bp    Location:359509..408010   Strand:+
Raw sequence 
>bmy_16854
ATGACCCGGGAGGAAAGAATCGAACAGTATACTTTTATCTACATTGATAAACAGCCTGAGGAGGCTTTATCCCAAGCAAAAAAGAATGTTGCCTCCAAAGCCGAAGTTAAAAAAACCCGAAGGCCAAGATCAGTGCTGAATACTCAGCCAGAACAGACCAGTGCAGGCGAGGCGGCCTCCTCACTATCAGGTACTGAAATTCGGAGACACAGCCAGAGGCGGCACACGAGCGTGGAAGAGGACGAACCACCTCCCGTTAAAGTAGCCTGGAAAACGGCAGCTGCGAGGAAATCCTTACCAGCTTCCATCACAATGCACAAAGGGAGCCTGGATTTGCAGAAGTGTAACATGTCTCCAGTTGTGAAAATTGAACAAGTGTTTGCTCTTCAGAATGCTACAGGAGATGGRAAATTTATCGATCAGTTTGTCTATTCAACGAAGGGAATTGGTAACAAAACAGAAATAAGTGTCAGGGGACAAGACAGACTTATAATTTCTACACCAAACCAGAGGAATGAAAAGGCAACTCAGAATACATCATCTCCTGAAACAACATCTGGTCCTGCAGGCTCAGTAGAAAAGAAGCAACAGAGAAGATCCATTAGAACCCGTTCCGAATCAGAGAAATCCACTGAGGTCGTGCCAAAGAAGAAGATCAAAAAGGAGCAGGTTGAAACAGTTCCTCAGGCTACAGTGAAGACTGGATTACAAAAAGGTGCCAGCGAGATTTCAGATTCCTGTAAACCTCTAAAGAAAAGGAGCCGCGCCTCAACTGATGTAGAAATGGCTAGTTCCACGTACAGAGACACGTCCGACTCCGATTCCAGAGGACTGAGTGACCTGCAGGTAGGCTTTGGAAAGCAAGTCGATAGCCCTTCGGCTACTGCAGATGCAGATGTTTCTGATGTGCAGTCCGTGGATTCCAGTTTGTCAAGAAGAGGCACTGGAATGAGTAGGAAGGACACTGTCTGTCAGTGCCTTTACCGTAAAATCTGTCAAATCATCGAGATGTATTTATGTTTATCTAAAGAGCTATACAAAGTTTGTAGAGTGAATTATTTTTCAGGAGAGCACCCGTGTTTTTCATGTAAAGTGTCTGGTACAGACGTGAAGCGTTGCTCTGTTGGTGCTTGTGGGAAATTTTACCATGAAGCCTGTGTCCGCAAATTCCCCACTGCCATCTTTGAATCAAAAGGATTCCGCTGTCCCCAGCACTGCTGCTCTGCCTGCTGTATGGAGAAAGATATCCACAAAGCRAGTAAAGGTCGCATGATGAGATGTTTGAGGTGCCCAGTAGCCTACCACTCTGGAGATGCTTGCATTGCTGCTGGCAGCATATTTGTGTCTTCCTACGTTCTCATCTGTAGTAATCATTCCAAACGGAGCAGTAACTCTTCCTCTGCTGTAAATGTAGGCTTTTGTTTCGTTTGTGCAAGAGGGCTGATAGTGCAGGACCATTCAGACCCCATGTTCAGTTCCTATGCCTATAAGTCCCACTACCTACTGAACGAATCAAATCGTGCAGAGTTGATGAAATTACCTATGATTCCTTCTTCGTCAGCTTCCAAAAAGAAATGTGAGAAAGGTGGAAGATTGCTCTGCTGTGAGTCGTGCCCGGCTTCCTTCCACCCGGAGTGCCTGAGCATAGAGATGCCAGAAGGCTGCTGGAATTGCAATGACTGTAAAGCTGGCAAGAAACTACATTACAAGCAGATTGTTTGGGTCAAATTGGGAAATTACAGGCAAGTTTTTCCAAGGACAAAGAGGAAATGGTGGCCAGCGGAGATCTGCAACCCCCGGTCTGTGCCGCTCAACATCCAGGGCCTCAAGCACGACCTGGGGGACTTCCCCGTGTTCTTCTTTGGTTCTCACGACTACTACTGGGTACACCAGGGCAGAGTGTTCCCTTACGTCGAAGGAGACAAAAGCTTTGCTGAGGGACAGACTAGTATTAACAAGACCTTCAAAAAAGCGTTGGAAGAAGCTGCAAAACGTTTCCAGGAATTGAAAGCGCAAAGAGAAAGTAAAGAAGCACTAGAGATTGAAAAAAACTCAAGGAAACCCCCTCCTTACAAACACATCAAAGTTGCAGACCTGTCAGAGATTCCCCGCTGTAACTGCAAGCCGGCTGACGAGAACCCGTGTGGCTTGGAGTCCGAGTGCCTGAACAGAATGCTGCAGTACGAGTGTCACCCGCAGGTGTGCCCGGCGGGGGAGCGCTGCCAGAACCAGTGCTTCACCAAGAGGCTCTACCCGGATGCAGAAATCATCAAGACGGAGCGGAGAGGCTGGGGCCTCAGGACCAAAAGGAGCATTAAGAAGGGTGAATTTGTAAATGAATATGTTGGCGAATTAATTGATGAGGAAGAATGCAGATTGCGAATCAAGCGAGCCCACGAGAACAGTGTAACTAATTTTTATATGTTAACTGTTACCAAGGACCGTATCATTGACGCTGGCCCGAAGGGAAATTATTCTCGCTTTATGAACCACAGTTGTAATCCAAACTGTGAAACACAAAAGTGGACGGTGAATGGAGATGTTCGAGTTGGCCTTTTTGCTCTTTGTGACATTCCTGCAGGGATGGAGCTAACATTTAATTACAACCTGGACTGTCTGGGCAATGGCCGGACGGAGTGCCACTGCGGGGCGGATAACTGCAGTGGTTTCCTCGGCGTGCGGCCAAAGTCGGCATGTGCGTCCACAACTGAAGAAAAGGCAAAAAACGCTAAGCTGAAGCAGAAGAGACGAAAAATCAAAACAGAGCCGAAGCAGCTGCATGAAGATCACTGCTTCCAGTGCGGGGACGGCGGCGAGCTGGTCATGTGCGACAGGAAGGATTGCCCCAAGGCCTACCACCTGCTCTGCCTCAACCTGCCCCAGCCGCCCTACGGAAAGTGGGAGTGCCCGTGGCATCAGTGCGATGAGTGCAGCGGCGCAGCTGTGTCCTTCTGTGAGTTCTGTCCACGTTCGTTTTGCAAAGATCATGAAAAGGGGGCTCTGGTGCCCTCTGCCCTGGAAGGCCGTCTCTGCTGCTCTGAACATGACCCTGTATCTCCCGTGTCACCCGAATACTGGAGCAAGATCAAATGTAAATTGGAATCACAAGATCACGGAGAAGAAGTCAAAGAATAA

Related Sequences

bmy_16854T0 SequenceType object (3)

Length: 1045 aa      View alignments
>bmy_16854T0
MTREERIEQYTFIYIDKQPEEALSQAKKNVASKAEVKKTRRPRSVLNTQPEQTSAGEAASSLSGTEIRRHSQRRHTSVEEDEPPPVKVAWKTAAARKSLPASITMHKGSLDLQKCNMSPVVKIEQVFALQNATGDGKFIDQFVYSTKGIGNKTEISVRGQDRLIISTPNQRNEKATQNTSSPETTSGPAGSVEKKQQRRSIRTRSESEKSTEVVPKKKIKKEQVETVPQATVKTGLQKGASEISDSCKPLKKRSRASTDVEMASSTYRDTSDSDSRGLSDLQVGFGKQVDSPSATADADVSDVQSVDSSLSRRGTGMSRKDTVCQCLYRKICQIIEMYLCLSKELYKVCRVNYFSGEHPCFSCKVSGTDVKRCSVGACGKFYHEACVRKFPTAIFESKGFRCPQHCCSACCMEKDIHKASKGRMMRCLRCPVAYHSGDACIAAGSIFVSSYVLICSNHSKRSSNSSSAVNVGFCFVCARGLIVQDHSDPMFSSYAYKSHYLLNESNRAELMKLPMIPSSSASKKKCEKGGRLLCCESCPASFHPECLSIEMPEGCWNCNDCKAGKKLHYKQIVWVKLGNYRQVFPRTKRKWWPAEICNPRSVPLNIQGLKHDLGDFPVFFFGSHDYYWVHQGRVFPYVEGDKSFAEGQTSINKTFKKALEEAAKRFQELKAQRESKEALEIEKNSRKPPPYKHIKVADLSEIPRCNCKPADENPCGLESECLNRMLQYECHPQVCPAGERCQNQCFTKRLYPDAEIIKTERRGWGLRTKRSIKKGEFVNEYVGELIDEEECRLRIKRAHENSVTNFYMLTVTKDRIIDAGPKGNYSRFMNHSCNPNCETQKWTVNGDVRVGLFALCDIPAGMELTFNYNLDCLGNGRTECHCGADNCSGFLGVRPKSACASTTEEKAKNAKLKQKRRKIKTEPKQLHEDHCFQCGDGGELVMCDRKDCPKAYHLLCLNLPQPPYGKWECPWHQCDECSGAAVSFCEFCPRSFCKDHEKGALVPSALEGRLCCSEHDPVSPVSPEYWSKIKCKLESQDHGEEVKE*