Part of scaffold_1388 (Scaffold)

For more information consult the page for scaffold_1388 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PPAPDC1B ENSTTRG00000004512 (Bottlenosed dolphin)

Gene Details

phosphatidic acid phosphatase type 2 domain containing 1B

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004239, Bottlenosed dolphin)

Protein Percentage 98.21%
cDNA percentage 98.66%
Ka/Ks Ratio 0.3586 (Ka = 0.0088, Ks = 0.0247)

PPAPDC1B ENSBTAG00000027635 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000039585, Cow)

Protein Percentage 89.62%
cDNA percentage 89.62%
Ka/Ks Ratio 0.17397 (Ka = 0.0566, Ks = 0.3255)

PPAPDC1B  (Minke Whale)

Gene Details

phosphatidic acid phosphatase type 2 domain containing 1B

External Links

Gene match (Identifier: BACU007421, Minke Whale)

Protein Percentage 97.26%
cDNA percentage 98.33%
Ka/Ks Ratio 0.36908 (Ka = 0.0122, Ks = 0.0331)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 783 bp    Location:413686..419024   Strand:+
>bmy_16855
ATGGGGAAGGAGGTGGCGGCGGAGGTGGGCGTGCGGCTCGCGCTGTTCGCGGCCTTCCTGGTAACAGAGCTGCTCCCGCCCTTCCAGAGGCTCATCCAGCCCGAGGAGATGTGGCTCTACCGGAATCCGTACGTGGAAGCAGAGTATTTCGCCACCAAGCCGATGTTTGTCGTCGCCTTGCTGGCCCCGCTGGCCCCGGTCCTCCTGGCCAGGTGTCTGAAGAAGGCGGACGCAGCGGACAGCCGGCAGGCCTGCCTGGCTGCCAGCCTGGCCCTGGCTCTGAACGGCGTCTTCACCAACACAGTCAAACTGATAGTGGGGAGGCCACGCCCAGACTTCTTCTACCGTTGCTTCCCCGACGGGCAAGCCCATCATGACTTGACGTGCACAGGAGATGAGGACGTGGTGAATGAGGGCCGCAAGAGCTTCCCCAGTGGACATTCTTCCTTTGCATTTGCTGGTCTGGCCTTCGCGTCCTTCTACCTGGCAGGGAAGTTACACTGCTTCACACCACGAGGCCGAGGGAAATCCTGGAGGTTCTGTTCCTTTCTGTCACCCCTACTCTTTGCAGCTGTGATTGCACTGTCCCGCACCTGTGATTACAAGCATCACTGGCAAGATGTCCTGGCTGGATCCGCCATCGGCCTGACGTTCGCCTACGTCTGCTACAGGCAGTACTACCCTCCCCTGACGGACGCCCAGTGCCACAGACCACTGCAGCGCAGCCCTGCTCTTCCCACCGCGCAAAAGCAGCCCGGCGACCCTCGTCATTTTGATGTTTAG

Related Sequences

bmy_16855T0 Protein

Length: 261 aa      View alignments
>bmy_16855T0
MGKEVAAEVGVRLALFAAFLVTELLPPFQRLIQPEEMWLYRNPYVEAEYFATKPMFVVALLAPLAPVLLARCLKKADAADSRQACLAASLALALNGVFTNTVKLIVGRPRPDFFYRCFPDGQAHHDLTCTGDEDVVNEGRKSFPSGHSSFAFAGLAFASFYLAGKLHCFTPRGRGKSWRFCSFLSPLLFAAVIALSRTCDYKHHWQDVLAGSAIGLTFAYVCYRQYYPPLTDAQCHRPLQRSPALPTAQKQPGDPRHFDV*