Part of scaffold_1377 (Scaffold)

For more information consult the page for scaffold_1377 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

QRFP ENSTTRG00000015177 (Bottlenosed dolphin)

Gene Details

pyroglutamylated RFamide peptide

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014387, Bottlenosed dolphin)

Protein Percentage 86.57%
cDNA percentage 92.54%
Ka/Ks Ratio 0.72796 (Ka = 0.0757, Ks = 0.1039)

BT.23584 ENSBTAG00000017980 (Cow)

Gene Details

orexigenic neuropeptide QRFP precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023922, Cow)

Protein Percentage 82.84%
cDNA percentage 84.58%
Ka/Ks Ratio 0.12504 (Ka = 0.0868, Ks = 0.6944)

QRFP  (Minke Whale)

Gene Details

pyroglutamylated RFamide peptide

External Links

Gene match (Identifier: BACU016209, Minke Whale)

Protein Percentage 94.07%
cDNA percentage 96.3%
Ka/Ks Ratio 0.37633 (Ka = 0.0276, Ks = 0.0734)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 564 bp    Location:538..3330   Strand:+
>bmy_16866
ATGCCCCTCATAAGGCTCCAGAGCAGGTGGATTCATCCACCAGATGGAATTCCATCCGGTCCAAAAGCTGTCTGCATTGCTTTCTATGGGGAGGAAACACCTTGTGAAAAGCCCCCACTCCATCCAGGCCCCGATGGAGAGGCTTCCCTGAAGCAGATGATGAGCCCTTACTCGCTGCCCTACCTCCTCTTCCTGCCGCTGGGTGCCTGCTTTCCTGTGCTGGACACAGAAGAGCCCGTGGACGCCGTGGGTGGCATTGGAGGCGAAGTGAGCCGGGCCGACCTGGCGGGGGGACGCCACTTCCCCTGGGGCTCCCCTGGGTGGCCGAGAGCGCCACACCCACACGCCCTGCTCGGCATGGCCAAGGAGCTGCAGACATTGGGCAGAGCGTGTGCCGGCTTCGAGTTGAGGCTCGGGAGGCAGCAGGACGATGGCAGTGAGGCCACCGGCTTCCTTCTGGGTGACGGCGAGAAAGCTGGTGGCCTGTTAGGGACCCTGGCAGAGGAGCTCAACAGCTACAGCAGGAAGAAAGGCGGCTTCAGCTTCTGCTTTGGCCGGGGGTGA

Related Sequences

bmy_16866T0 Protein

Length: 188 aa      View alignments
>bmy_16866T0
MPLIRLQSRWIHPPDGIPSGPKAVCIAFYGEETPCEKPPLHPGPDGEASLKQMMSPYSLPYLLFLPLGACFPVLDTEEPVDAVGGIGGEVSRADLAGGRHFPWGSPGWPRAPHPHALLGMAKELQTLGRACAGFELRLGRQQDDGSEATGFLLGDGEKAGGLLGTLAEELNSYSRKKGGFSFCFGRG*