Part of scaffold_1377 (Scaffold)

For more information consult the page for scaffold_1377 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PRDM12 ENSTTRG00000015155 (Bottlenosed dolphin)

Gene Details

PR domain containing 12

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014364, Bottlenosed dolphin)

Protein Percentage 86.12%
cDNA percentage 85.41%
Ka/Ks Ratio 0.01821 (Ka = 0.0031, Ks = 0.1679)

PRDM12 ENSBTAG00000023797 (Cow)

Gene Details

PR domain zinc finger protein 12

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000032579, Cow)

Protein Percentage 88.64%
cDNA percentage 87.72%
Ka/Ks Ratio 0.09688 (Ka = 0.072, Ks = 0.7428)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1287 bp    Location:178842..163869   Strand:-
>bmy_16870
CCTCTTCTCTCGCCCCTGTGCTCCCCACTCGCCCACCACATCCCCGCCTCGGCCCGTCCGGCCGTCCGTCCCTCCCCGGCGCCGGCGAGCCCCGGGCCGCCCATGATGGGCTCCGTGCTCCCGGCTGAGGCCCTGGTGCTCAAGACAGGGCTGAAGGCGCCGGGGCTGGCGCTGGCAGAGGTCATCACCTCCGACATCCTGCACAGCTTCCTGTACGGCCGCTGGCGCAACGTGCTGGGCGAGCAGCTCTTCGAAGACAAGAGCCACCACGCCAGCCCCAAGACAGCCTTCACCGCCGAGGTCCTGGCGCAGTCCTTCTCGGGCGAGGTGCAGAAGCTGTCCAGCCTGGTGCTGCCGGCTGAGGTGATCATCGCGCAGAGCTCCATCCCCGGCGAGGGCCTCGGCATCTTCTCCAAGACGTGGATCAAGGCGGGCACCGAGATGGGCCCCTTCACCGGCCGCGTCATCGCCCCGGAGCACGTGGACATCTGCAAGAACAACAACCTCATGTGGGAGGTGTTCAACGAGGATGGCACGGTGCGCTACTTCATCGACGCCAGCCAGGAGGACCACCGAAGCTGGATGACCTACATCAAATGCGCACGTAATGAACAGGAGCAGAACCTGGAGGTGGTCCAGATTGGCACCAGCATCTTCTACAAAGCCATTGAGATGATCCCTCCAGACCAGGAGCTGCTGGTGTGGTATGGAAACTCACACAACACCTTCCTGGGGATCCCTGGTGTGCCCGGGCTGGAGGAGGAGCAGAAAAAGAACAAGCATGAGGACTTCCACCCGGCGGACCCGGCGGCGGGCACCTCGGGCCGCATGCGCTGCGTCATCTGCCACCGCGGCTTCAACTCGCGCAGCAACCTGCGCTCGCACATGCGCATCCACACGCTGGACAAGCCCTTCGTGTGCCGCTTCTGCAACCGCCGCTTCAGCCAGTCGTCCACGCTGCGCAACCACGTGCGCCTGCACACGGGCGAGCGCCCCTACAAGTGCCAGGTGTGCCAGAGCGCCTACTCGCAGCTGGCCGGCCTGCCATCTGAATGGATTGATGCTATTGTCTGCATGAAAAGGAAATATGGAAAAGGAAAAGGAAATATGGAAAAGGAAAAGGAAAAATGTCTAGAAGTTGGAGAGGCGGCAGGAAGAGTTGTTCCACTTACTGGTTTTGAAAGTCACCCTTGTCACAGCTGGGTGTCAGCTCCCAGAGCGATGACTACAGTACAAAAAAATCAGAAATCTCCCAAGGGGCTGGGCAGATTCCTCGTGGTTTCCAGC

Related Sequences

bmy_16870T0 Protein

Length: 429 aa      View alignments
>bmy_16870T0
PLLSPLCSPLAHHIPASARPAVRPSPAPASPGPPMMGSVLPAEALVLKTGLKAPGLALAEVITSDILHSFLYGRWRNVLGEQLFEDKSHHASPKTAFTAEVLAQSFSGEVQKLSSLVLPAEVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDICKNNNLMWEVFNEDGTVRYFIDASQEDHRSWMTYIKCARNEQEQNLEVVQIGTSIFYKAIEMIPPDQELLVWYGNSHNTFLGIPGVPGLEEEQKKNKHEDFHPADPAAGTSGRMRCVICHRGFNSRSNLRSHMRIHTLDKPFVCRFCNRRFSQSSTLRNHVRLHTGERPYKCQVCQSAYSQLAGLPSEWIDAIVCMKRKYGKGKGNMEKEKEKCLEVGEAAGRVVPLTGFESHPCHSWVSAPRAMTTVQKNQKSPKGLGRFLVVSS