Sequence detailsbmy_16881 (Coding sequence)

Part of scaffold_1392 (SequenceType object (1))

For more information consult the page for scaffold_1392 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ARHGEF16ENSTTRG00000003431 (Bottlenosed dolphin)

Gene Details

Rho guanine nucleotide exchange factor (GEF) 16

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003219, Bottlenosed dolphin)

Protein Percentage 78.25%
cDNA percentage 84.51%
Ka/Ks Ratio 0.35109 (Ka = 0.1107, Ks = 0.3153)

ARHGEF16ENSBTAG00000020837 (Cow)

Gene Details

rho guanine nucleotide exchange factor 16

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000027769, Cow)

Protein Percentage 80.06%
cDNA percentage 84.37%
Ka/Ks Ratio 0.19734 (Ka = 0.1179, Ks = 0.5972)

Additional orthologs identified in other species via the OPTIC pipeline.

ARHGEF16 (Human)   Arhgef16 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1929 bp    Location:520112..533626   Strand:+
Raw sequence 
>bmy_16881
ATGTCCCAGCAGCACTCGGACAGCTCCTTGGAGGAGGAGCTCCTGGAATACCGCTTCCACTCGGAGCTGCAGCTCGACACCAAGGGAAACCCAGCGTCCGGGCTCCCGATGGTCCGGGGCTCCCTGCAAAGCAGGAGCAATGCCGCCTTCCAGCCCGACAGCCCGGTGCCCCCGTCGCCGTCCCCTGAGGCCCAGGAGCTGAGGACCATCGTCCTGAGCACGCAGAGCCCGGCAGCCCTCAAGATGGGCACTCAGCAGCTGATCCCCCGGAGCCTGGCTGTGTCCAGCAAGGCTAAGACCCCGGCCCGCCATCAGAGCTTTGGGGCGGCCATGCTCAGCAAAGAGGCTGCCCGGCGGGACCCCCGGCTCCTCTCGGCCCCCAGCTTCTCCCTGGACGACATGGACGTGGACACGGGTCCTGGGGGGATGCTGAGACGAAATCTGAGGAACCAATCCTACCGGGCGGCCATGAAGGGGCTGGGGACCCCCGGCGGCGAGGGCGGCCCCGTCCAGCTCAGCCCCAAGATCCCTGCTCTGGCCGAGGAGCCCAGCCAGCCTCCTGCTCGGTCCGCGGCCAAAAATAAGAAGACGCTGGGGCGGAAACGCGCACACAAGGGCTCCTTCAAGGATGATCCCCGGTTCTACCAGGAGATCCAGGAGCGAGGCCTGAACACCAGCCACGAGTCCGACGATGACCTGCTCGATGAGTCCTCCAGCCCTGACGGAACCCGAAAGGTGGATGCCCACATCGTGGTCAAGAGCTACCGGCCCCCCCAGGTCACCTGGAGCCAGCTCCCAGAGGTGGTGGAGTCGGGCATCCTGGACAAGCTGCCCGCCGAGGAGCACAAGAGGCAGGAGGCCATCTTCGAGATCCTCACGTCCGAGTACTCATACCAGCACAGCCTCGGCATCCTGGTGGCCGAGTTCCTGCAGTCCCCGGAGCTTCGGGCGACCATGACCCAGACAGAGCACCACCACCTCTTCTCCAACATCACGGACGTCCTGAGCGCCAGCAGGAGGTCAGGCCCGGGCCCAGCCCGTCGGCCTGGCACCCGACGGCGCAGGCTCTCGAGGCTGGTGAAGCAGTGCAACGAGGGGGCCCACAAGATGGAACGCACGGAGCAGATGTACACGCTGCACACACAGCTGGACTTCAGTAAGGTCAAGCCCAGGGAGGCCTGGGCACCCCGTTCCCAGAGGCAGGGCTCAGTCCCCGTGGCTGCACATCCCGGCCACCCCCCGGGACTCATCCCTGTCCCCGCTCTGCCCCAGTCCCTCCCACTGATCTCTGCTTCCCGCTGGCTGCTGAAGCGCGGGGAGCTCTTCGTGGTGGAAGAAACCGGGCTTTTCCGAAAACTCGCCAGCCGGCCGACATGCTACCTGTTCCTGTTCAACGACGTCCTCGTGGTCACCAAGAAGAAGAGCGAGGACAGCTTCGTGGTCCAGGACTACGCCCAGCTGGACCACATCCAGGTCCAGAAGATAGAGGCCTCGGAGGCCTCTCTGCCGGGGGGCGGCAACCGCAGCTCCTTCGTGCCGTACGCCTTCCAGCTGACCCTGCTGCACAACAGCGAGGGCCGCCAGGGGAAGATCCTGCTCTCCTCCGACTCCGCGAGTGACCGCGCGCGGTGGATCACAGCGCTCACGCACTGGGAGAGGCAGCGGCTGGGCCCCACTAACAAAGGAGACCTGCTCCAGGTGGAGATCACCAAGGCCTACCTGGCCAAGCAGGTGGACGAGATCACACTGCAGCAGGCAGATGTGGTCCTGATCCTGGAGCAAGAGGACGGATGGTTCTATGGCGAGAGGCTGCGGGATGGAGAGACAGGCTGGTTCCCTGAGGACTTAGCCCGGAGCATCACCAGCCGCGTGGCCGTGGAGGGCAACATGCGCAGGATGGAGCGGCTGCGGGTGGAGACGGGTGTGTAG

Related Sequences

bmy_16881T0 SequenceType object (3)

Length: 643 aa      View alignments
>bmy_16881T0
MSQQHSDSSLEEELLEYRFHSELQLDTKGNPASGLPMVRGSLQSRSNAAFQPDSPVPPSPSPEAQELRTIVLSTQSPAALKMGTQQLIPRSLAVSSKAKTPARHQSFGAAMLSKEAARRDPRLLSAPSFSLDDMDVDTGPGGMLRRNLRNQSYRAAMKGLGTPGGEGGPVQLSPKIPALAEEPSQPPARSAAKNKKTLGRKRAHKGSFKDDPRFYQEIQERGLNTSHESDDDLLDESSSPDGTRKVDAHIVVKSYRPPQVTWSQLPEVVESGILDKLPAEEHKRQEAIFEILTSEYSYQHSLGILVAEFLQSPELRATMTQTEHHHLFSNITDVLSASRRSGPGPARRPGTRRRRLSRLVKQCNEGAHKMERTEQMYTLHTQLDFSKVKPREAWAPRSQRQGSVPVAAHPGHPPGLIPVPALPQSLPLISASRWLLKRGELFVVEETGLFRKLASRPTCYLFLFNDVLVVTKKKSEDSFVVQDYAQLDHIQVQKIEASEASLPGGGNRSSFVPYAFQLTLLHNSEGRQGKILLSSDSASDRARWITALTHWERQRLGPTNKGDLLQVEITKAYLAKQVDEITLQQADVVLILEQEDGWFYGERLRDGETGWFPEDLARSITSRVAVEGNMRRMERLRVETGV*