Part of scaffold_1408 (Scaffold)

For more information consult the page for scaffold_1408 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

POLI ENSTTRG00000014645 (Bottlenosed dolphin)

Gene Details

polymerase (DNA directed) iota

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013886, Bottlenosed dolphin)

Protein Percentage 83.76%
cDNA percentage 85.59%
Ka/Ks Ratio 0.72737 (Ka = 0.0188, Ks = 0.0259)

BT.24784 ENSBTAG00000009129 (Cow)

Gene Details

DNA polymerase iota

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012034, Cow)

Protein Percentage 89.3%
cDNA percentage 92.61%
Ka/Ks Ratio 0.31905 (Ka = 0.0527, Ks = 0.1653)

POLI  (Minke Whale)

Gene Details

polymerase (DNA directed) iota

External Links

Gene match (Identifier: BACU014880, Minke Whale)

Protein Percentage 90.76%
cDNA percentage 93.29%
Ka/Ks Ratio 0.61126 (Ka = 0.0618, Ks = 0.1011)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2019 bp    Location:526567..550228   Strand:+
>bmy_16884
ATGATCTCAAATCCAGAGCTAAAAGGCAAACCTTTAGGGGTTCAGCAGAAATATTTGGTGGTTACCTGCAACTATGAAGCTAGGAAACTTGGAGTTAAGAAACTTATGAATGTCAGAGATGCAAAAGAAAAGTGTCCACAGCTAGTATTAGTTAACGGAGAAGACTTGACTCSTTACAGAGAGATGTCATATAAGGTTACAGAGTTGTTGGAAGAATTTAGTCCAATTGTTGAGAGACTCGGGTTTGATGAAAATTTTGTGGATCTAACAGAAATGGTTGAGAAGAGACTAGAGCAGCTTCAAAGTGATGAACCCTCAGCACTGACTGTGTCGGGTCATGTATACGATAATCAGCCTATAAACCTGCATGACATCTTGCACATCAGACTACTTATTGGATCTCAGATTGCAGCTGAGATGCGGGAAGCCATGTATAATCAGTTGGGTCTCACAGGCTGTGCTGGAGTGGCTTCTAATAAATTATTGGCAAAATTAGTGTCTGGCATCTTTAAACCAAATCAGCAAACACTCTTACTACCTGAAAGTTCTCAAGATCTCATTCATAGTTTGAACCACATAAAGGAAATGCCTGGTATTGGCTATAAAACTACCAAACGTCTGGAAGCACTGGGTATCAGTAGTGTGCGTGATCTTCAAACCTTTTCATCCAAAATATTAGAAAAGGAATTAGGAATTTCAGTTGCTCARCGTATCCAGAAGCTCAGTTTTGGAGAGGATAACTCTCCTGTGACACCCTCAGGACCACCTCAGTCCTTTAGTGAGGAAGATTCATTTAAATGTTCATCAGAAGTTGAAGCTAAAAATAAGATTGAAGAACTACTTGCTAGTCTTTTGAACAGAGTCTGCCAAGATGGAAGGAAGCCACATACAATAAGATTAATAATCCGTCGATATTCACCTGAGAAGCACTATAACCGTGAGAGTCGTCAGTGCCCAATTCCATCCCACATAATTCAGAAGTTAGGGATAGGAAATTATGATGTGATGACCCCAATGGTTGATGTACTTATGAAACTTTTTCGAAATATGGTGAATGTGAAGATGCCATTTCATCTTACCCTTTTAAGTGTGTGCTTCTGCAACCTTAAAGCCCTAAATACTGCTAAGAAAGGGACTATTGATTATTATTTAACACCATCATTATCAACAACTTCACGCTCTGGCAAGCACAGTTTTAAAATGAAAGACACTCATATGGAGGATTTTTCTAAAGACAAGGAAACAAATTGGGATTTTCTACCAACTGGAAGAATTGAAAGTACAAGAACTGGGGAGTCTCCACCAGATACTACAAGTTTTTCTAAAGAAAAAGACAGTAACGAATTTCCACTCTCCTCACTTCCTGAGGGTATTGACCAAGAGGTCTTTAAGCAGCTTCCAGTAGATATTCAAGAAGAAATCCTTTCTGGAAAATCTAGAGAAAAAGTTCAAGGGAAAGGAAGTTTGAGTTGTCCATTACATGCTTCTAGAGGAGTATTATCTTTCTTTTCTACAAAACAAATGCAAGATGGTTCCTTAAATCCTAGGGATCATTTATCCAAAACCAAACAGATAACCTCTGTATCTCCCTGTGAACCAGGAACATCAGGCTTAAATAGCAGTAGTTCCTCTTATGTGTCTAACCAAAAGGATTATTCACATTATGTAGACAGTAGCTTAAAAGATGAACTAATGAGTCAAGGACCTAAAGAGTCTAAAGGATTCCACTTTTCAAAAACAGACCCTGCTGTATCTGTTTTCCATTCATTTCCAAATTTGCAGAGTGAGCAACTTTTCTCCAAAAACTGCACTACAGACAGCCATAAACCACCGATGGCAACAGTCTTTATTCATGAAGGACTTACAGAAAATAGAGAGCAAGATTCTACCGAAGAGAAAGTTACTTTTCCTTCTGACATTGATCCTGAAGTTTTCTATGAACTACCAGAAGAGGTACAAAAAGAACTGTTGGCTGATTGGAAGAGAACAGGATCAGATTTCCACACTGTACATAAATAA

Related Sequences

bmy_16884T0 Protein

Length: 673 aa      View alignments
>bmy_16884T0
MISNPELKGKPLGVQQKYLVVTCNYEARKLGVKKLMNVRDAKEKCPQLVLVNGEDLTXYREMSYKVTELLEEFSPIVERLGFDENFVDLTEMVEKRLEQLQSDEPSALTVSGHVYDNQPINLHDILHIRLLIGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGIFKPNQQTLLLPESSQDLIHSLNHIKEMPGIGYKTTKRLEALGISSVRDLQTFSSKILEKELGISVAQRIQKLSFGEDNSPVTPSGPPQSFSEEDSFKCSSEVEAKNKIEELLASLLNRVCQDGRKPHTIRLIIRRYSPEKHYNRESRQCPIPSHIIQKLGIGNYDVMTPMVDVLMKLFRNMVNVKMPFHLTLLSVCFCNLKALNTAKKGTIDYYLTPSLSTTSRSGKHSFKMKDTHMEDFSKDKETNWDFLPTGRIESTRTGESPPDTTSFSKEKDSNEFPLSSLPEGIDQEVFKQLPVDIQEEILSGKSREKVQGKGSLSCPLHASRGVLSFFSTKQMQDGSLNPRDHLSKTKQITSVSPCEPGTSGLNSSSSSYVSNQKDYSHYVDSSLKDELMSQGPKESKGFHFSKTDPAVSVFHSFPNLQSEQLFSKNCTTDSHKPPMATVFIHEGLTENREQDSTEEKVTFPSDIDPEVFYELPEEVQKELLADWKRTGSDFHTVHK*