Sequence detailsbmy_16888 (Coding sequence)

Part of scaffold_1386 (SequenceType object (1))

For more information consult the page for scaffold_1386 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

OPN4ENSTTRG00000007814 (Bottlenosed dolphin)

Gene Details

opsin 4

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007386, Bottlenosed dolphin)

Protein Percentage 93.06%
cDNA percentage 95.68%
Ka/Ks Ratio 0.42793 (Ka = 0.0362, Ks = 0.0846)

Additional orthologs identified in other species via the OPTIC pipeline.

OPN4 (Cow)   OPN4 (Human)   Opn4 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1437 bp    Location:34121..44858   Strand:+
Raw sequence 
>bmy_16888
ATGAACTCTCCTTTGGGGACAGGAGCCCCACCGGACCCGGCCCAGGAATCCAACGGCATAGCCACCCCAGCCTCCCGCAGCAGGTGGGACAGCTCCTGGAGCAGCACCTCCAGCCTGGACCACCCTCCGCCCGTCAGCCCCACGGCAGCCAGGGCTCAGGCTGCTGCCTGGGTCCCCTTTCCCACGGTCGATGTTCCATACTATGCCCACTACACCCTGGGCACGGTGATCCTGCTGGTGGGGCTCACAGGGATGCTGGGAAATCTGACGGTCATCTATACCTTCTGCAGGAGCAGAGGTCTCAGGACACCTGCCAACATGTTCATCATCAACCTCGCAGCCAGCGACTTCCTCATGTCCTTCACCCAGGCCCCCGTCTTCTTCGCCAGCAGCGTCTATAAGCAGTGGCTCTTTGGAGAGGCAGGCTGTGAATTCTATGCCTTCTGTGGGGCTCTCTTTGGCATCACCTCCATGATTACCCTGACGGCCATCGCCCTGGACCGCTACCTGGTGATCACACGCCCACTGGCCACCGTCGGGATGGTGTCCAAGAGGCGGGCGGCGCTTATCCTGCTGGGCGTCTGGCTCTATGCCCTGGCTTGGAGTCTGCCGCCCTTCTTTGGCTGGAGTGCCTATGTGCCCGAGGGGCTGCTGACCTCTTGCTCCTGGGACTACGTGAGCTTCATGCCATCGGTCCGCGCCTACACCATGCTGCTCTTCTGCTTTGTGTTCTTCCTCCCCCTGCTTGTCATCATCTACTGCTACATCTTCATCTTCAAGGCCATCCGGGAGACGGGCCAAGCTCTCCAGACTTTCGGGGCCAGCGAGGGTGGTGGTGAGTGCCCCTGGCAACGGCAGCGTCTGCAGAACGAGTGGAAAATGGCCAAGATCGAGCTGTTGGTCATCCTTCTCTTCGTACTCTCCTGGGCCCCCTACTCCACTGTGGCCCTGATGGGCTTTGCTGGGTATGCACATGTCCTGACGCCCTACATGAACTCGGTGCCAGCTGTCATCGCCAAGGCCTCTGCCATCTACAACCCCATCATTTATGCCATCACCCACCCCAAGTACAGAATGGCCATCGCCCAGCACCTGCCCTGCCTCGGGGTGCTGCTGGGCGTGTCAGGCCAGCACAATGGCCTGTACACCAGCTACCGCTCCACCCACCGCTCCACGCTGAGCAGCCAGGCCTTGGACCTCAGCTGGATCTCTGGACGGAGGCGCCAGGTGTCCCTGGGCTCTGAGAGCGAGGTGGGCTGGACAGACACAGAGGCAACAGCTGCTTGGGGGACTGCCCAGCAACTGAGTGGATGGTCCCCCTGCGGTCAGGGCCTGGAGGATGTGGAAGCCAAGGCCTCTCCCAAGTCCCAGGGACAGGAAGCAGAGGCTCCCGGAAAGACCAAAGGGCTGCTCCCCAGCCTGGACCCCAGGATGTAG

Related Sequences

bmy_16888T0 SequenceType object (3)

Length: 479 aa      
>bmy_16888T0
MNSPLGTGAPPDPAQESNGIATPASRSRWDSSWSSTSSLDHPPPVSPTAARAQAAAWVPFPTVDVPYYAHYTLGTVILLVGLTGMLGNLTVIYTFCRSRGLRTPANMFIINLAASDFLMSFTQAPVFFASSVYKQWLFGEAGCEFYAFCGALFGITSMITLTAIALDRYLVITRPLATVGMVSKRRAALILLGVWLYALAWSLPPFFGWSAYVPEGLLTSCSWDYVSFMPSVRAYTMLLFCFVFFLPLLVIIYCYIFIFKAIRETGQALQTFGASEGGGECPWQRQRLQNEWKMAKIELLVILLFVLSWAPYSTVALMGFAGYAHVLTPYMNSVPAVIAKASAIYNPIIYAITHPKYRMAIAQHLPCLGVLLGVSGQHNGLYTSYRSTHRSTLSSQALDLSWISGRRRQVSLGSESEVGWTDTEATAAWGTAQQLSGWSPCGQGLEDVEAKASPKSQGQEAEAPGKTKGLLPSLDPRM*