Part of scaffold_1399 (Scaffold)

For more information consult the page for scaffold_1399 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LRRC40 ENSTTRG00000015053 (Bottlenosed dolphin)

Gene Details

leucine rich repeat containing 40

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014269, Bottlenosed dolphin)

Protein Percentage 86.57%
cDNA percentage 87.34%
Ka/Ks Ratio 0.42416 (Ka = 0.0334, Ks = 0.0786)

LRRC40 ENSBTAG00000008243 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010846, Cow)

Protein Percentage 93.85%
cDNA percentage 93.15%
Ka/Ks Ratio 0.17218 (Ka = 0.0343, Ks = 0.1991)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1710 bp    Location:368289..407206   Strand:+
>bmy_16910
ATCTCACTTCTTTCCCTTCTTTTTTTTTTTGGTGTGGTGGTGGTGGAAATAGTGCCTCAGTGTGTTTGGAGAATAAACGTGGATATCCCTGAAGAAGCTAATCAGAATCTTTCATTCAGTGCTACTGAGCGATGGTGGGAACAGACAGATTTGACCAAACTAATCATATCAAACAATAAACTTCAGTCACTTACTGATGACCTCCGACTCCTTCCTGCACTGACTGTTCTTGATATACATGATAATCAGCTGACATCCCTTCCTTCTGCTATAAGAGAGTTAGAAAATCTTCAGAAACTTAATGTCAGCCATAACAAGCTGAAAATACTCCCTGAAGAAATTACAAATCTAAGAAACCTGAAGGGCCTATATCTCCAGCATAATGAACTAACTTGCATACCAAGGGGATTTGAACAACTTTCCAACTTAGAAGATTTAGATCTTTCGAACAATCATCTTACAACTGTTCCTGCTAGTTTTGCTTCTCTATCCAGGCTGCTGCAACTCAATCTTTCCAGTAATCAACTGAAGAGTTTGCCTGCAGAAATAAGTGGAATGAAAAGATTAAAGCATTTGGATTGTAATTCAAATCTCTTGGAAACTATACCTTCTGAATTGGCTAGCATGGAATCACTAGAATTGCTTTATTTGCGGAGGAATAAATTACGTTTTCTACCGGAATTTCCTTCTTGTAAATTATTAAAGGAATTACATGTAGGTGAAAACCAGATTGAAATGTTGGGGGCAGAACACCTTAAGCATCTGAATTCTATCCTTGTGCTAGACCTGCGAGATAACAAGTTAAAATCTGTTCCAGATGAAATTACACTCCTGCAATCTTTGGAAAGGCTTGACCTAAGCAACAATGATATTAGTAGTCTGCCCTGTTCATTGGGAGAACTTCATTTGAAATTCCTGGCACTAGAAGGAAATCCTTTGAGAACGATTCGAAGAGAAATTATAAATAAAGGAACCCAAGAAGTCTTAAAATATCTACGAAGCAAGATTAAAGATGATGGACCTAGCCAAAGTGATTCTGTTACTGAGACTGCCATGACACTACCAAGTGAATCTAGAGTCAATGTACACGCCATCATCACATTAAAAATATTAGACTATAGTGATAAACAAACAACTTTGATTCCTGATGAAGTGTTTGATGCAGTAAAAAGTAACATTRTCACTTCYGTTAACTTCAGTAAGAATCAGCTATGTGAAATTCCCAAAAGGATTGTGGAACTGAAGGAAATGGTTTCTGATGTCAATCTCAGTTTTAATAAGCTTTCCTTTATATCCTTGGAATTATGTATGCTTCAAAAATTAACTTTTTTAGATCTGAGGAATAATTTTTTAAATTCTTTGCCTGAAGAAATGGAATCATTGATAAGACTACAAACAATCAACCTTTCCTTTAATAGGTTCAAAATACTACCTGAAGTTCTGTATCGAATTCCCACACTTGAAACAATTTTGATTAGTAACAATCAGGTTGGGTCTGTGGACCCTCAGAAAATGAAGACAATGGAAAATCTGATTACCTTGGACCTTCAAAATAATGACCTCCTACAAATTCCACCAGAGCTTGGTAATTGTGTGAACTTAAGGACATTGCTACTAGATGGAAATCCGTTCCGYGTTCCTCGAGCAGCCATATTAATGAAAGGAACAGCTGCTATTCTGGAATATTTGAGAGACCGAATTCCTACTTAA

Related Sequences

bmy_16910T0 Protein

Length: 570 aa      View alignments
>bmy_16910T0
ISLLSLLFFFGVVVVEIVPQCVWRINVDIPEEANQNLSFSATERWWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKGLYLQHNELTCIPRGFEQLSNLEDLDLSNNHLTTVPASFASLSRLLQLNLSSNQLKSLPAEISGMKRLKHLDCNSNLLETIPSELASMESLELLYLRRNKLRFLPEFPSCKLLKELHVGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGELHLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSDSVTETAMTLPSESRVNVHAIITLKILDYSDKQTTLIPDEVFDAVKSNIXTSVNFSKNQLCEIPKRIVELKEMVSDVNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLIRLQTINLSFNRFKILPEVLYRIPTLETILISNNQVGSVDPQKMKTMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIPT*