Sequence detailsbmy_16910 (Coding sequence)

Part of scaffold_1399 (SequenceType object (1))

For more information consult the page for scaffold_1399 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LRRC40ENSTTRG00000015053 (Bottlenosed dolphin)

Gene Details

leucine rich repeat containing 40

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000014269, Bottlenosed dolphin)

Protein Percentage 86.57%
cDNA percentage 87.34%
Ka/Ks Ratio 0.42416 (Ka = 0.0334, Ks = 0.0786)

LRRC40ENSBTAG00000008243 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000010846, Cow)

Protein Percentage 93.85%
cDNA percentage 93.15%
Ka/Ks Ratio 0.17218 (Ka = 0.0343, Ks = 0.1991)

Additional orthologs identified in other species via the OPTIC pipeline.

LRRC40 (Human)   Lrrc40 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1710 bp    Location:368289..407206   Strand:+
Raw sequence 
>bmy_16910
ATCTCACTTCTTTCCCTTCTTTTTTTTTTTGGTGTGGTGGTGGTGGAAATAGTGCCTCAGTGTGTTTGGAGAATAAACGTGGATATCCCTGAAGAAGCTAATCAGAATCTTTCATTCAGTGCTACTGAGCGATGGTGGGAACAGACAGATTTGACCAAACTAATCATATCAAACAATAAACTTCAGTCACTTACTGATGACCTCCGACTCCTTCCTGCACTGACTGTTCTTGATATACATGATAATCAGCTGACATCCCTTCCTTCTGCTATAAGAGAGTTAGAAAATCTTCAGAAACTTAATGTCAGCCATAACAAGCTGAAAATACTCCCTGAAGAAATTACAAATCTAAGAAACCTGAAGGGCCTATATCTCCAGCATAATGAACTAACTTGCATACCAAGGGGATTTGAACAACTTTCCAACTTAGAAGATTTAGATCTTTCGAACAATCATCTTACAACTGTTCCTGCTAGTTTTGCTTCTCTATCCAGGCTGCTGCAACTCAATCTTTCCAGTAATCAACTGAAGAGTTTGCCTGCAGAAATAAGTGGAATGAAAAGATTAAAGCATTTGGATTGTAATTCAAATCTCTTGGAAACTATACCTTCTGAATTGGCTAGCATGGAATCACTAGAATTGCTTTATTTGCGGAGGAATAAATTACGTTTTCTACCGGAATTTCCTTCTTGTAAATTATTAAAGGAATTACATGTAGGTGAAAACCAGATTGAAATGTTGGGGGCAGAACACCTTAAGCATCTGAATTCTATCCTTGTGCTAGACCTGCGAGATAACAAGTTAAAATCTGTTCCAGATGAAATTACACTCCTGCAATCTTTGGAAAGGCTTGACCTAAGCAACAATGATATTAGTAGTCTGCCCTGTTCATTGGGAGAACTTCATTTGAAATTCCTGGCACTAGAAGGAAATCCTTTGAGAACGATTCGAAGAGAAATTATAAATAAAGGAACCCAAGAAGTCTTAAAATATCTACGAAGCAAGATTAAAGATGATGGACCTAGCCAAAGTGATTCTGTTACTGAGACTGCCATGACACTACCAAGTGAATCTAGAGTCAATGTACACGCCATCATCACATTAAAAATATTAGACTATAGTGATAAACAAACAACTTTGATTCCTGATGAAGTGTTTGATGCAGTAAAAAGTAACATTRTCACTTCYGTTAACTTCAGTAAGAATCAGCTATGTGAAATTCCCAAAAGGATTGTGGAACTGAAGGAAATGGTTTCTGATGTCAATCTCAGTTTTAATAAGCTTTCCTTTATATCCTTGGAATTATGTATGCTTCAAAAATTAACTTTTTTAGATCTGAGGAATAATTTTTTAAATTCTTTGCCTGAAGAAATGGAATCATTGATAAGACTACAAACAATCAACCTTTCCTTTAATAGGTTCAAAATACTACCTGAAGTTCTGTATCGAATTCCCACACTTGAAACAATTTTGATTAGTAACAATCAGGTTGGGTCTGTGGACCCTCAGAAAATGAAGACAATGGAAAATCTGATTACCTTGGACCTTCAAAATAATGACCTCCTACAAATTCCACCAGAGCTTGGTAATTGTGTGAACTTAAGGACATTGCTACTAGATGGAAATCCGTTCCGYGTTCCTCGAGCAGCCATATTAATGAAAGGAACAGCTGCTATTCTGGAATATTTGAGAGACCGAATTCCTACTTAA

Related Sequences

bmy_16910T0 SequenceType object (3)

Length: 570 aa      View alignments
>bmy_16910T0
ISLLSLLFFFGVVVVEIVPQCVWRINVDIPEEANQNLSFSATERWWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKGLYLQHNELTCIPRGFEQLSNLEDLDLSNNHLTTVPASFASLSRLLQLNLSSNQLKSLPAEISGMKRLKHLDCNSNLLETIPSELASMESLELLYLRRNKLRFLPEFPSCKLLKELHVGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGELHLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSDSVTETAMTLPSESRVNVHAIITLKILDYSDKQTTLIPDEVFDAVKSNIXTSVNFSKNQLCEIPKRIVELKEMVSDVNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLIRLQTINLSFNRFKILPEVLYRIPTLETILISNNQVGSVDPQKMKTMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIPT*