Sequence details bmy_16911 (Coding sequence)

Part of scaffold_1399 (Scaffold)

For more information consult the page for scaffold_1399 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LRRC7 ENSTTRG00000015047 (Bottlenosed dolphin)

Gene Details

leucine rich repeat containing 7

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014268, Bottlenosed dolphin)

Protein Percentage 97.03%
cDNA percentage 97.65%
Ka/Ks Ratio 0.30155 (Ka = 0.0119, Ks = 0.0395)

LRRC7 ENSBTAG00000009338 (Cow)

Gene Details

leucine rich repeat containing 7

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012294, Cow)

Protein Percentage 94.75%
cDNA percentage 93.63%
Ka/Ks Ratio 0.16926 (Ka = 0.0333, Ks = 0.1967)

LRRC7  (Minke Whale)

Gene Details

leucine rich repeat containing 7

External Links

Gene match (Identifier: BACU009943, Minke Whale)

Protein Percentage 98.71%
cDNA percentage 98.75%
Ka/Ks Ratio 0.32356 (Ka = 0.0085, Ks = 0.0263)

Additional orthologs identified in other species via the OPTIC pipeline.

LRRC7 (Human)   Lrrc7 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3030 bp    Location:539396..491785   Strand:-
Raw sequence 
>bmy_16911
ATGTATTTAATTTTCAGTTTATCTTTATTAGAAGAATTTGACTGTAGCTGTAATGAACTGGAGTCACTACCTTCTACYATTGGCTACCTTCACAGTCTTCGAACATTAGCAGTCGATGAGAATTTCCTTCCAGAATTACCCAGAGAAATTGGAAGCTGTAAGAATGTAACAGTTATGTCTCTACGCTCCAATAAACTGGAATTTCTTCCTGAAGAGATTGGACAGATGCAGAAACTAAGAGTCTTAAATTTGAGTGACAACAGATTGAAGAATTTACCATTCTCATTTACCAAACTTAAGGAGCTTGCAGCTTTGTGGCTTTCTGACAATCAGTCCAAAGCCCTTATCCCTTTACAAACTGAAGCCCATCCAGAAACAAAGCAAAGAGTATTGACTAACTACATGTTTCCACAGCAACCTCGTGGTGATGAAGATTTCCAGTCAGACAGTGACAGCTTTAACCCTACACTGTGGGAAGAACAGAGACAACAACGCATGACTGTTGCCTTTGAATTTGAAGAAAAAAAGGAAGATGATGAAAATGCTGGGAAAGTTAAGGTTGAAATAAACCTAAAACGATATCCAACTCCTTACCCAGAGGATTTAAAGAATATGGTAAAATCTGTTCAAAATCTGGTGGGTAAGCCAAGCCATGGAGTGCGTGTTGAGAATTCAAATCCAACTGCTAACACGGAGCAAACTGTGAAAGAAAAATACGAACACAAGTGGCCTGTAGCCCCAAAGGAGATTACAGTGGAGGATTCTTTTGTTCATCCAGCTAATGAAATGAGGATTGGGGAACTTCACCCTTCATTAGCTGAGACCCCTCTGTACCCACCCAAACTTGTTCTGCTAGGGAAGGACAAAAAAGAATCAACTGATGAGTCTGAAGTTGACAAAACTCACTGTCTGAATAACAGTGTTTCCTCAGGCACTTACTCAGACTACTCGCCTTCCCAGGCTTCCTCAGGATCCTCTAACACCCGGGTTAAAGTGGGGTCCTTGCAGACAACAGCTAAAGAGGCAGTACATAATTCTTTGTGGGGTAACAGGATTGCACAATCTTTCCCACAGCCTCTTGATGCAAAGCCATTGCTCAGCCAGCGGGAGGCTGTCCCCCCAGGGAATCTACCACAGCGTCCTGACCGGCTGCCATTGAGTGACACTTTCACTGACAACTGGACTGATGGCTCACATTATGATAACACAGGGTTTGTTGCAGAGGAAACCACAGGCGAGAATGCCAACAATAATCCTCTCCTGAGTTCAAAATCTAGAAGCACATCTTCTCATGGACGCAGGCCTTTGATTAGGCAGGATAGGATTGTTGGTGTTCCCCTGGAACTTGAGCAGTCTACACACAGACACACACCAGAAACAGAAGTGCCTCCTTCCAATCCTTGGCAGAATTGGACCAGAACCCCTAGTCCTTTTGAAGACAGGACTGCTTTCCCTTCCAAATTAGAGACAACCCCTACCACCAGCCCATTGCCTGAAAGGAAAGAACATATAAAAGAATCTGCTGAAATACCTAGTCCTTTTTCTCCAGGAGTACCGTGGGAGTATCATGATTCTAATCCCAACAGGAGTCTCAGTAATGTCTTTTCTCAAATCCACTGCCGCCCAGAATCTTCTAAAGGTGTTATTTCGATTAGCAAAAGCACAGAGAGGCTTTCCCCACTCATGAAAGACATCAAGTCCAATAAATTCAAGAAGTCACAGAGTATCGATGAGATTGACATTGGTACATACAAGGTTTATAATATACCATTAGAAAACTATGCTTCTGGGAGTGATCACTTAGGAAGTCACGAACGACCTGACAAAATGTTAGGACCAGAGCATGGTATGTCCAGTATGTCTCGAAGCCAGTCAGTCCCGATGCTGGATGATGAGATGCTCACTTATGGAAGTAGTAAAGGGCCACAACAACAAAAAGCTTCCATGACAAAAAAAGTCTATCAATTTGACCAAAGCTTCAATCCCCAAGGAGCAGTGGAAGTTAAAGCTGAAAAGAGGATACCGCCCCCGTTTCAACACAATGCTGAGTACGTGCAACAGCCGGGAAAAAACATCACCAAGGATTTGGTTAGTCCTAGAGCTTACAGAGGATACCCACCGATGGAGCAAATATTTTCATTTTCTCAGCCATCTGTTAATGAGGATGCTGTGGTAAATGCCCAGTTTGCAAGCCAAGGTGCCAGGGCAGGCTTCTTGAGAAGAGCTGACTCCCTGGCGAGTTCCACAGAAATGGCCATGTTTAGAAGGGTCAGTGAACCTCATGAGCTGCCTCCGAATGATAGGTACGGCAGACCTCCATATAGGGGAGGTCTGGATCGCCAAAGCAGCGTTTCAGTGACTGAGTCCCAGTTCCTGAAAAGGAATGGCAGGTATGAAGATGAACACCCTTCATATCAAGAAGTGAAAGCTCAGGCGGGAAGTTTTCCAGTTAAAAACCTCACCCAAAGGAGGCCATTGTCTGCAAGAAGCTACAGTACAGAGAGTTATGGTGCCTCCCAAACCAGGCCAGTTTCAGCTAGGCCTACTATGGCAGCTCTTTTGGAAAAAATACCATCTGACTATAACTTGGGTAACTATGGTGACAAGCCATCAGATAACAGTGATATAAAGACGAGGCCTACTCCTGTGAAGGGAGAGGAGAGCTGTGGTAAAATGCCTGCAGACTGGAGACAACAGCTGCTTAGACATATAGAAGCTAGAAGGTTAGACAGGAAYGCTGCTTACAAACACAACACAGTTAACCTTGGCATGCTGCCCTATGGAGGTATTTCAGCAATGCATGCAGGCAGAAGCATGACTTTAAACTTGCAGACTAAGTCTAAATTTGATCTACAAGAACTACCTCTTCAGAAAACCCCGTCCCAGCAAAGCAACATTTTAGACAATGGACAAGAAGATGTATCTCCTAGTGGCCAGTGGAATCCTTATCCTCTTGGGAGGCGGGATGTACCTCCGGACACCATTACTAAAAAGGCCCCCAAATTGAAATTTTTGCTTTTTCAGACCATA

Related Sequences

bmy_16911T0 Protein

Length: 1010 aa      View alignments
>bmy_16911T0
MYLIFSLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKALIPLQTEAHPETKQRVLTNYMFPQQPRGDEDFQSDSDSFNPTLWEEQRQQRMTVAFEFEEKKEDDENAGKVKVEINLKRYPTPYPEDLKNMVKSVQNLVGKPSHGVRVENSNPTANTEQTVKEKYEHKWPVAPKEITVEDSFVHPANEMRIGELHPSLAETPLYPPKLVLLGKDKKESTDESEVDKTHCLNNSVSSGTYSDYSPSQASSGSSNTRVKVGSLQTTAKEAVHNSLWGNRIAQSFPQPLDAKPLLSQREAVPPGNLPQRPDRLPLSDTFTDNWTDGSHYDNTGFVAEETTGENANNNPLLSSKSRSTSSHGRRPLIRQDRIVGVPLELEQSTHRHTPETEVPPSNPWQNWTRTPSPFEDRTAFPSKLETTPTTSPLPERKEHIKESAEIPSPFSPGVPWEYHDSNPNRSLSNVFSQIHCRPESSKGVISISKSTERLSPLMKDIKSNKFKKSQSIDEIDIGTYKVYNIPLENYASGSDHLGSHERPDKMLGPEHGMSSMSRSQSVPMLDDEMLTYGSSKGPQQQKASMTKKVYQFDQSFNPQGAVEVKAEKRIPPPFQHNAEYVQQPGKNITKDLVSPRAYRGYPPMEQIFSFSQPSVNEDAVVNAQFASQGARAGFLRRADSLASSTEMAMFRRVSEPHELPPNDRYGRPPYRGGLDRQSSVSVTESQFLKRNGRYEDEHPSYQEVKAQAGSFPVKNLTQRRPLSARSYSTESYGASQTRPVSARPTMAALLEKIPSDYNLGNYGDKPSDNSDIKTRPTPVKGEESCGKMPADWRQQLLRHIEARRLDRNAAYKHNTVNLGMLPYGGISAMHAGRSMTLNLQTKSKFDLQELPLQKTPSQQSNILDNGQEDVSPSGQWNPYPLGRRDVPPDTITKKAPKLKFLLFQTI