Part of scaffold_1403 (Scaffold)

For more information consult the page for scaffold_1403 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ANKUB1 ENSTTRG00000003453 (Bottlenosed dolphin)

Gene Details

ankyrin repeat and ubiquitin domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003236, Bottlenosed dolphin)

Protein Percentage 14.72%
cDNA percentage 31.17%
Ka/Ks Ratio 0.1606 (Ka = 1.6629, Ks = 10.3542)

ANKUB1 ENSBTAG00000031346 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000041916, Cow)

Protein Percentage 82.77%
cDNA percentage 86.94%
Ka/Ks Ratio 0.37642 (Ka = 0.1056, Ks = 0.2807)

ANKUB1  (Minke Whale)

Gene Details

ankyrin repeat and ubiquitin domain containing 1

External Links

Gene match (Identifier: BACU012804, Minke Whale)

Protein Percentage 91.16%
cDNA percentage 94.1%
Ka/Ks Ratio 0.80309 (Ka = 0.0592, Ks = 0.0738)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 891 bp    Location:83547..88580   Strand:+
>bmy_16912
ATGGGCTGGAACCATCACCACCTCTCTTCATCCACAGGCACAACACTTCGCTTGGACGTCTGGGATGGATGGAAAGAATTTCTGATGGGCTGTCTCCTCGGACAAAAACTTAAAGTCCAACGCTATTTATCAAATGAAGGACCAGTACTCAAGTATCAGAAAAGGGTTGCCCTGTACATCGCCGCCTTTTATGGGCACACTGAGCTCACTGAATGGGCCCTGAAGCAGGGTGTGCGGCCCCACGAGATGGTCGGTGTGCACCCCTACCGAGCTTGGTGCCATGAAGCCCTTCACGCAGATGTCTCTAAATGCCCCATTCATGCAGCCGCAGAAGCGGGCCAACTGTTGACTCTGAAGGCTTTTGTCAACTGCAGCGTGCTGTGCCTGGAATGCAAAAACGCAGCGGGACAAACTCCCCTTACCATTGCGTCCAAACACAAGCATAAAGACTGCGTATTATATCTACTGAGTAAAATGTGGTCCACTGTTTCTTTTCTGAAAATCTCAGTCCCCATGAGGATTTATATTAAAATAAAACAATGGGTACTCAGAGCTCAGAGTCACAACTTTAATAAAAGCCAGCTTTGCGGAGCAAGGGTCTTTGGAGCAAAAGTTGGAGACATTGTGATGGTGGATGGTTTCACCAAACCCAAAATGACCTCCAAGAGCTGGCATAAGGCTGAGAACAAGGACTCACACGGCACTGCGGGCAAACTCCCGCCTCTCAGGGAGCAAACTGTAAGCAGGAAACGTGTCAATCCTTTCGCAATTTCACAGCAGGACACAAGAGAACAAACACTCAAATTTCCTCCGCTGGTAGATGCAAATACGTCCTTTGAATTACAAAAACAACAAAATCGGAAAAAAATTTCACTGAAAACACAACTCTGA

Related Sequences

bmy_16912T0 Protein

Length: 297 aa      View alignments
>bmy_16912T0
MGWNHHHLSSSTGTTLRLDVWDGWKEFLMGCLLGQKLKVQRYLSNEGPVLKYQKRVALYIAAFYGHTELTEWALKQGVRPHEMVGVHPYRAWCHEALHADVSKCPIHAAAEAGQLLTLKAFVNCSVLCLECKNAAGQTPLTIASKHKHKDCVLYLLSKMWSTVSFLKISVPMRIYIKIKQWVLRAQSHNFNKSQLCGARVFGAKVGDIVMVDGFTKPKMTSKSWHKAENKDSHGTAGKLPPLREQTVSRKRVNPFAISQQDTREQTLKFPPLVDANTSFELQKQQNRKKISLKTQL*