Part of scaffold_1396 (Scaffold)

For more information consult the page for scaffold_1396 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

USP6NL ENSTTRG00000002143 (Bottlenosed dolphin)

Gene Details

USP6 N-terminal like

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002009, Bottlenosed dolphin)

Protein Percentage 95.33%
cDNA percentage 96.62%
Ka/Ks Ratio 0.36415 (Ka = 0.0234, Ks = 0.0642)

USP6NL ENSBTAG00000019488 (Cow)

Gene Details

USP6 N-terminal-like protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025957, Cow)

Protein Percentage 85.77%
cDNA percentage 86.32%
Ka/Ks Ratio 0.2116 (Ka = 0.0824, Ks = 0.3892)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2259 bp    Location:473168..513071   Strand:+
>bmy_16937
ATGCTAAAAGGATGGGAAAAATACAAGAACACTGAAAAGTTTCATAGGAGAATTTACAAAGGAATCCCACTCCAGCTCAGAGGGGAAGTCTGGGCCCTCCTCCTGGAGATCCCGAAAATGAAGGAAGAAACCAGAGACCTATATAGTAAATTAAAACACAGAGCACGGGGTTGTTCACCTGATATCAGACAAATAGACCTTGATGTCAACCGCACATTTAGGGACCATATCATGTTTAGAGACAGATATGGTGTGAAGCAGCAATCCCTGTTCCACGTTCTTGCTGCATATTCTATCTACAATACGGAAGTTGGGTACTGTCAGGGGATGAGCCAGATCACAGCTTTACTCCTCATGTATATGAATGAAGAAGATGCCTTCTGGGCCCTGGTCAAACTGTTCTCGGGCCCCAAACATGCCATGCATGGATTTTTTGTCCATGGTTTTCCCAAACTCTTGAGGTTTCAAGAACATCATGAAAAAATACTGAATAAATTTTTGTCCAAGCTTAAGCAGCACTTGGATTCTCAAGAAATCTACACAAGTTTTTACACAATGAAATGGTTTTTTCAATGTTTCCTTGATCGGACTCCCTTTACACTAAACCTCAGAATATGGGACATCTATATCTTTGAAGGAGAACGAATTCTTACTGCTATGTCTTACACAATCTTAAAATTACACAGAAAACATCTTATGAAATTGTCTATGGAAGAACTTGTGGAATTTCTTCAGGAGACCTTGGCAAAGGATTTTTTCTTTGAAGACGACTTTGTAATAGAGCAGCTCCAGATTTCTATGGTGGAACTAAAGCGGGCAAAGTTAGACCTTCCAGAACCTGGTAAAGAGGATGAATTTCCAAAGAAACCTTTGGGACAACTTCCCCCTGAATCTCAATCAGCTGGCGTCAGTCACCTGAGCAACGGACAGAGGAGTGTGGGCAGGTCAAGTCCGCATCCGGAGGGGAGGAGAGAGAGCGGCTCGTCACCTTACAAAGCCCACGAGCATTCCCCTCCCCGTCAAAGTAGAACAGGTACCCCCGAGAGGGCGYGGCAGCTGCAGCGGAAGTCGGTGGACGAGGAGAGTAAAAAGCTTAAAGACGAGGTGGATTTTCAAAGGAGACTTCCATCGGGTCCACAGGACAATTCCAGGCAGTATAACCACGCAGCCGCTAACCAGAATAGCAACGCCACTTCACACGTCAGGAAGGAGTTTGTGCCCAAATGGAATAAGCCGTCAGATATCTCAGCTATTGAGAAAACTGCCAAGTATGCCATTGAAGGGCGAAGTCGGGCYGCACACCCCACGCCGAGAGTCGCCGTCCCCGGTTCCGCTGATGCGCGGCCCCCCAGCGTCAGGCAGAAGAAGGTGAAGGTGCTGGATGCGGATGAAGGGAAGCGTGGCTCCACCGCCTCACAGTACGACAACGTACCCGGGGACGGTGCCAGCGCGGCCCTGGAGCAGGCGCTGGAGAGGGCGCGCTCCCAGAGCCCCCGGGGCGCGGCCTACGCTCACAGCCCCCGGAGGCACGCTGAGCCCAGCTCCAGTCCCTTCGCAGCCCCGAACGCGTTTACTTTCAAAGTACAGCCTCCGGGTTATGCAAAACATCCATCCCAGTCAGACGGGGAGGATCGAGGGGCAGCGCACCCCCCGTCTTACAGTGAGCCCCCCACTTACCAGGGCAGTTCTCCGAAACGCATCCCTGCTGCTAACAGCAGCTTTGTGTCTCCACTGTTTCCCCACGGGACGCCAGTGAATCCTTCCCGGAGACCTTACGGTTCTACTCTTTCGACTGATGTTTCTCCAGAGAAATCTTACAGCCGCCCAGCTCCTCTGGTCCAGCCGTCCAGTCGAATAGAAGTTCTCCCTGTTGATATTGGTGCTGGGGGATATTCGGGCAATTCAGGGTCACCAAAGAATGGGAAATTCCTCCTTCCTCCAGTGGATTGTTTGCCAGATAACGGAAAATGGTCGGAAGTTGGTTACACATTGAGACCGGAGATGCACGGACAGTCGTGGACTCGTGATGCCAACCGTAGCCACTTAAGCAGTTTACCCAAATACCCCACCTTTCAACATGTCCCCTATCAGGACCACACCCTCCCTGCAGTTTCAGTAGATAGTCCGGTGCGGTATCGAACTTCCCCAGCTCTGGAAGATGCCAATTCATCTGGGTATCAGTATTCAGGTCCCTCGCCTCCAGTATATCACTACAGGAATCGGGATGGACTCTGTATCCAGGAATCAGTATTGCTGTGA

Related Sequences

bmy_16937T0 Protein

Length: 753 aa      View alignments
>bmy_16937T0
MLKGWEKYKNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGFFVHGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLRIWDIYIFEGERILTAMSYTILKLHRKHLMKLSMEELVEFLQETLAKDFFFEDDFVIEQLQISMVELKRAKLDLPEPGKEDEFPKKPLGQLPPESQSAGVSHLSNGQRSVGRSSPHPEGRRESGSSPYKAHEHSPPRQSRTGTPERAXQLQRKSVDEESKKLKDEVDFQRRLPSGPQDNSRQYNHAAANQNSNATSHVRKEFVPKWNKPSDISAIEKTAKYAIEGRSRAAHPTPRVAVPGSADARPPSVRQKKVKVLDADEGKRGSTASQYDNVPGDGASAALEQALERARSQSPRGAAYAHSPRRHAEPSSSPFAAPNAFTFKVQPPGYAKHPSQSDGEDRGAAHPPSYSEPPTYQGSSPKRIPAANSSFVSPLFPHGTPVNPSRRPYGSTLSTDVSPEKSYSRPAPLVQPSSRIEVLPVDIGAGGYSGNSGSPKNGKFLLPPVDCLPDNGKWSEVGYTLRPEMHGQSWTRDANRSHLSSLPKYPTFQHVPYQDHTLPAVSVDSPVRYRTSPALEDANSSGYQYSGPSPPVYHYRNRDGLCIQESVLL*