Part of scaffold_1425 (Scaffold)

For more information consult the page for scaffold_1425 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SGPP1 ENSTTRG00000002240 (Bottlenosed dolphin)

Gene Details

sphingosine-1-phosphate phosphatase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002094, Bottlenosed dolphin)

Protein Percentage 87.53%
cDNA percentage 90.1%
Ka/Ks Ratio 0.83154 (Ka = 0.103, Ks = 0.1239)

SGPP1 ENSBTAG00000004430 (Cow)

Gene Details

sphingosine-1-phosphate phosphatase 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005808, Cow)

Protein Percentage 81.12%
cDNA percentage 85.84%
Ka/Ks Ratio 0.56316 (Ka = 0.1354, Ks = 0.2404)

SGPP1  (Minke Whale)

Gene Details

sphingosine-1-phosphate phosphatase 1

External Links

Gene match (Identifier: BACU018602, Minke Whale)

Protein Percentage 88.31%
cDNA percentage 90.94%
Ka/Ks Ratio 0.91555 (Ka = 0.0961, Ks = 0.105)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2247 bp    Location:39299..90088   Strand:+
>bmy_16944
ATGAACCAGTTAAAGAATGCAGGCCACGGGGAAACACGGAAGGATTTTAAGCAGGATAGAACTGTGATCCAGTTTGCCTTTCAAAAAGCAGTTTTTAAAGCAGGGAAGAGATTTGAGGGGGTGGTGAATGGAGCCAGAGGTATGAAGAAGACAATGATTCTAACTGAATATGCTGAGTTTGAGATGATGGATATTTGTACGGTCGTCCGGGTGCTTGGCCACTGGCACCGCCGAACCTGGCACCGGGATCGTGGCCTCTCCCAGTCAACGCTAGACCGAGAGAAGCCAGCAACCCCAGCTGGCGGGGAACGAGGGCTGAAGTTGGAGAAGGAGGACGCGCAAAGTCCCGCCCGCCGAGCGCCGCGACGCCTGGTGGGTATTAATAAGAAGAACCTCAAGGCCGCGGCCCCGCCGAGCCTCAGGCGCCCTGACACCGCCCGTGTGAGCTCGGGGCGGACCCAAGCGGCCGGGCCCCCTTCCTTAGTGGCCATGGGGGCGGGGCGGGGCGCGGCGCGCGCCGGCGCGTGGAGGCCGCGGGCGGTGGAGGAGCGCTCGGTGAGGGAGGAGCGCGCGGGGCGGGGGCGCGCGGGGCGAGGGCGCGCGGGGCGGGGGCGCGCGGCGGCCGCTGAGGCCTGTGGCGCCGTCACCCGGCAGACCCGAGCGGTTGGAGGGAGGCGCTGCCGGCGAGGCGCGCGGAGACAGATCGGGGCTGCACCGGCGGCCGGTCCACCCTCCCGCCGCCGTCCTCCGGCCCGCGGACCGCGCGGTCCCGTTATCATGTCGTTGAGGCAGCGGCTGGTCCAGCTGGTCGGCAGTTTGCAGGACCCGCAGAAAGTGGCTCGTTTCCAACGGCTGTGCGGGGTGGAAGCGCCGGTGAGCCGCACCGCCACAGCTGCCGCCGACCCGAGGGAGGATGAGAAGGCGGAGGCGCCCCTCGCCGGGGAATCCAGGCGCCGAGAGCGGCAGCTGGGGGCGTCCGGAGGCCCCCCGCCGCCCGGGAGCGACCGCAATCAGTGCCCAGCCAAGCCGGGCGGCGGCGGCGGCGCCCCCAACGGCGTGCGGAACGGGCGGGCAACCGAGCTGGGCCCGGCCTCGCAGCGGCGCGCGGGGGTCCTGCGCCGCAACTCGCTGACGGGCGAGGAGGGCCAGCTGGCCCACGTGAGCAACATGCCTCTCTACTACCTGTTCTGCTTCGGCACGGAGCTGGGCAATGAACTCTTTTACATCCTGTTCTTCCCCTTCTGGATCTGGAACCTGGACGCCCTAGTGGGCCGGAGGCTCGTGGTCATCTGGGTGCTGGCCATGTACCTGGGCCAGTGCACCAAGGACATCATCCGCTGGCCGCGGCCCGCCTCGCCGCCCGTGGTCAAGTTGGAGGTTTTCTACAACTCAGAGTACAGCATGCCCTCCACCCATGCCATGTCCGGCACTGCCATCCCCATCTCCATGATCCTCCTCACCTATGGCCGCTGGCAGCCTGAATTGGGAAAAAATAAGAATGGAGGGGCAAATATGGACAACAAATTACGTGATGCTGAATATCGAAAGGAAGATGGGGAAATGGCAAATAGCAGTCAGTCACTGATGGAAGTGAGAGGAAGCATACCGGATGTTATTGCTGGATTCGTATATACCATTTTAATCTTAGCTATCTTCTATCCATTTGTGGACCTGATTGACAACTTCAACCAAACTCACAAATATGCTCCATTAATCATCATCGGGCTTCATTTAGCCTTGGGGATCTTTTCTTTCACTCTAGACACTTGGAGTACATCCCGGGGAGACACAGCTGAGATTCTAGGAAGTGGTGCTGGGATTGCATGTGGATCTCATTTTACCTATAAAATGGGTCTAATGTTAGATCCTCCTCTGGATATATTACCTTTACCTAGGCCCCCCATTTCAGTGACTCTGTTTGGAAAAGCCATATTGCGGATTCTCGTAGGGATGTTGTTTGTACTAGTAGTCAGAGATATAATGAAAAGGATCACTATTCCTTTAGCCTGTAAAATCTTCCATATACCGTGTGATGATGTTCGAAAAGCAAGACAGCACATGGAAGTTGAACTTCCTTATCGTTCTGTACACTGTGTTGAATGTACTTTATTTGCACTTGTTCTGGACATTAGTTTAATAATTCAGCACAAAGACTCCCCTGGATTCCAAATGTCTCCAAGCCCAGACTTACGGGACTCAACTGGGGTTGGTGACAATGAAGTGGATTCTAATTCCCCTAATATTTAA

Related Sequences

bmy_16944T0 Protein

Length: 749 aa      View alignments
>bmy_16944T0
MNQLKNAGHGETRKDFKQDRTVIQFAFQKAVFKAGKRFEGVVNGARGMKKTMILTEYAEFEMMDICTVVRVLGHWHRRTWHRDRGLSQSTLDREKPATPAGGERGLKLEKEDAQSPARRAPRRLVGINKKNLKAAAPPSLRRPDTARVSSGRTQAAGPPSLVAMGAGRGAARAGAWRPRAVEERSVREERAGRGRAGRGRAGRGRAAAAEACGAVTRQTRAVGGRRCRRGARRQIGAAPAAGPPSRRRPPARGPRGPVIMSLRQRLVQLVGSLQDPQKVARFQRLCGVEAPVSRTATAAADPREDEKAEAPLAGESRRRERQLGASGGPPPPGSDRNQCPAKPGGGGGAPNGVRNGRATELGPASQRRAGVLRRNSLTGEEGQLAHVSNMPLYYLFCFGTELGNELFYILFFPFWIWNLDALVGRRLVVIWVLAMYLGQCTKDIIRWPRPASPPVVKLEVFYNSEYSMPSTHAMSGTAIPISMILLTYGRWQPELGKNKNGGANMDNKLRDAEYRKEDGEMANSSQSLMEVRGSIPDVIAGFVYTILILAIFYPFVDLIDNFNQTHKYAPLIIIGLHLALGIFSFTLDTWSTSRGDTAEILGSGAGIACGSHFTYKMGLMLDPPLDILPLPRPPISVTLFGKAILRILVGMLFVLVVRDIMKRITIPLACKIFHIPCDDVRKARQHMEVELPYRSVHCVECTLFALVLDISLIIQHKDSPGFQMSPSPDLRDSTGVGDNEVDSNSPNI*