Part of scaffold_1412 (Scaffold)

For more information consult the page for scaffold_1412 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NYNRIN ENSBTAG00000007149 (Cow)

Gene Details

protein NYNRIN

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009407, Cow)

Protein Percentage 90.34%
cDNA percentage 91.24%
Ka/Ks Ratio 0.18048 (Ka = 0.0474, Ks = 0.2626)

NYNRIN  (Minke Whale)

Gene Details

NYN domain and retroviral integrase containing

External Links

Gene match (Identifier: BACU008681, Minke Whale)

Protein Percentage 98.71%
cDNA percentage 98.73%
Ka/Ks Ratio 0.17971 (Ka = 0.0055, Ks = 0.0304)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 6174 bp    Location:58708..40940   Strand:-
>bmy_16953
GCGCGCCGCCGGGAGGAGGGGGCGTGGCTTAGGCGCCTTCGGCCGGGGGACCCCGGTGGCACTGTCGGCTCCCTCCTTCCTGGGGCGGGCGGGCCAGCCATGCTCCTGTCCGGGGGCGACCCTCCGGCGCAGGAATGGTTCATGGTGCAGACCAAGTCGAAGCCCCGGGTGCAGCGGCAGCGGCTGCAAGTGCAGCGCATCTTCAGGGTCAAGCTGAACGCTTTCCAGAGCCGCCCGGACACCCCCTACTTCTGGCTGCAGCTCGAGGGGCCCAGGGAGAACATGGGCAGAGCCAAGGAGTATCTGAAGGGCCTGTGCAGCCCGGAGCTGTGGAAGGAGGTCCGCTACCCGGCGGCCCTGCACTGCGCCTTCCTTGGGGCCCAGGGCCTCTTCTTGGACTGCCTGTGCTGGAGCACGCTGGCCTACCTGGTGCCTGGCCCGCCGGGCTCCCTGATGGTGGGCGGGCTGACCGAGTCTTTCATCATGACCCAGAACTGGCTGGAGGAGCTGGTAGGGCGGCTGCGCTGGGGCCCTGCCCCTCTGCTCACCCCCCGGGGCATCTGGGAAGCCGAGGTGACCCGGGCTTTTGGGGCTCTGGTCTGGATCCGTGGTGACCAGTATGCAGGGGACCTGCTGCAGCTGCCCGCAGCAGTCCAGGAACTGCTGCTGAGCCTGGTGCGGGATGCTGCGGGCAAGGAGGACATCATCCAGTGGCTCGGCTGCATTGGCACCTCCGACTCCCGCTCGGACCCCGAGCTCCTGATCTGCCCAACCCACCAGCAGAAGGAAGGTCCAGCCATGGTGTCCATGGGAGACGGTCCTGGGCCTTTTCTGGAGATGGGGAGCCCAGAAAATTCAAAGAGGTTAACCAGCCTAGGAGCCATGGGGGCCCTAATCCCAGGCCAGAACGCTCAGCTGGAGACAGCAAACCAGCTGGTACGGGTTGGTTCCAACAACCAAGGTGGTACGGACAGTGCTTGTGAGGAAGGGTCAGTACAAGCCAGCAGCAGCCAGGACCCTGCGGACCGCACACAAGCCTCGTCCCAGCAGCGGCAGGCCCGGAGGGGGGAAGACAAGCTCCCTCTCCAGCCTCCAGTATCAGCCCTGAGTGTGTGCTCGCCCTGGAAGTCCTGGACCCCGGGGCCAGCCTTTGGGCCCTTGTGGCCGGGGACTATTGCTGCAACCTTCTGGAGGATCAATGAACTGCATTCTCTCCACCTGGCCTGGCTCCTGTCCCAGGCTTGCTTCAGTTTCCCTTTCTGGCAGAGGCCACTGGGCCCCATTCAGTTCAAGCTGCCAGGRCAGAATCCTTTGCCCTTAAATCTGGGATGGAAACAGAAGGAGCTGGTTCCTTTGCCCAGTGTGGAAAGCCCAGACTGCAGACCAGATGGGGGGCCAGGMGGAGAGGCAGCCCTTCAGAATTGCCCAAGGCCAGAGACCCCTAAAAAAGTAATGAGTTTAYTGGTGGTCTCAGGAGGCTCAGGGGTAAAGGACAAGGCTAGCCCAGGACTTCCACAGATAGGGCCACCTTTGACYTCTACACCCCAACTCCAAGCTGGAAGTGAGCCGGGGGATCGAGGAAATATGCAGTGGGATTGTAAGGAGCCCGAAGAGAGGCCGTTTCCAGGGCCCTCCACAGGGCAAGGGGTGCCTACTGCTCGGGGGAGGCCCGCCACTCAAGGGGGGCTGACAGCTCCTTCAGGACCTGAACCTCAAACAGTGCCTGAAACTCTCAAAGTGCCCATGGCTGCAGCAGTGCCCACAGCTCAAACCCCACCCACAAATCCCGTGCTGCCTGAAGCCCCCAAAGTGCCTGAAACCCAGACTATGCCGGCAGTCCATGAAGAACCTGCAGCCCCCAAAGTGCCTTTGGCTCCGACGAAGCCAGCAGCTCAAGTGGTGCCCACGGCACAAAAGGCAGCTGTGGGTGAACTGGCACCAGCAGCTCAAATGGTGCCTGCAGCCCCCAAAACTCCCACAACTCTGAAAAGGCATGCAGCGAAAACATCACCTGCAGGTCCCCAAACACCCAGAGCCCAGACTGGGACTACAGCTAAAACAGGGTCTGCAGCTCCTAAAGNAGCTCCTTCAGGACCTGAACCTCAAACAGTGCCTGAAACTCTCAAAGTGCCCATGGCTGCAGCAGTGCCCACAGCTCAAACCCCACCCACAAATCTCGTGCTGCCTGAAGCCCCCAAAGTGCCTGAAACCCAGACTATGCCGGCAGTCCATGAAGAACCTGCAGCCCCCAAAGTGCCTTTGGCTCCGACAAAGCCAGCAGCTCAAGTGGTGCTCACGGCACAAAAGGCAGCTGTGGGTGAACTGGCACCAGCAACTCAAATGGTGCCTGCAGCCCCCAAAACTCCCACAACTCCGAAAAGGCATGCAGCGAAAACATCACCTGCAGGTCCCCAAACACCCAGAGCCCAGACTGGGACTACAGCTAAAACAGGGTCTGCAGCTCCTAAAGCCCCTGCAGCCCCCAAAGCACCTGCAGCTCCCMAAACTTCCAGAGCTCTGAAAATGCCTGCAGCTCAGAAGGCACCCACAGATCCAGGGCCAACCCTGGATGCAGCCAAATTCCMAAGTGAGGGCCAGCCTTCGTCAAGGGGCAGTGCTTCCTTCCTGAAGGGCCAGGGGGAAGCTGGAAGGCAGGGGCCCCAGTCCAGTGGCACTTTGGCTCCCAGTAGTAAGCGCCAACCTCAGGTGGAGGGGCTCCTAGGGGCTTGGGAGGGGGTTCCGAGGCAGCCGCCTCGCCACCCACAGGCGAACAGCACAGTAACCAGCTTCCAGAGGTACCACGAGGCCCTGAATACACCCTTTGAGCTGAACCTGTCAGAAGAACCAGGGAACCAGGGGTTGAGGCGAGTGGTCATTGACGGCAGCAGCGTGGCCATGGTGCACGGCCTCCAGCACTTCTTCTCCTGCCGGGGCATTGCCATGGCAGTGCAGTATTTCTGGAACCGGGGACACCGAGAGGTCACTGTGTTTGTACCCACCTGGCAGCTTAAGAAGAACCGGAGGGTGAGAGAGAGCCACTTTCTGACGAAGCTACACTCCCTCAAGATGCTTTCAATCACCCCCTCTCAGCTTGAGAATGGCAAGAAGATCACTACCTACGATTATAGGTTCATGGTAAAGCTGGCGGAAGAGACAGATGGCATCATCGTCACCAACGAGCAGCTCCACGTCCTGATGAATAATTCCAAGAAACTTATGGTCAAAGATCGCCTGCTGCCCTTCACTTTTGCGGGGAATCTCTTCATGGTGCCCGACGATCCTCTGGGCCGTGATGGCCCCACTCTGGATGAGTTTCTGAAGAAGCCAAACAGGTTGGACACTGACATTGGCAACTTCCTGAAGGTGTGGAAGACCCTTCCTCCCAGCTCTGCCAGTGTCTCTGAGCTGAGTGAGGATGCTGACCCTGGGCCCCCGGAGAGTCCGCAGAATGTGGAAGAAGTCAGGGAGGAGAGGGAGGAGAGGCAAGATGAGGAGCAGGAGATGCAGAAGCCGGCCGAGAAGGAGGATGACCTGGACTCTTCGCTGATGTCCGTGTTCAGGGCTGAGTGCTCTTCCCTCTCAGAGGAGATACTCCGGTGCCTCAGCCTGCACGACCCCCAGGATGAAGCCCTCGACATCGATCTCCTGCCGGCGGTACCTTCTCCCTCCCTGGGCATCCCCTGGGATGGGAAGGCTCCCTGCCAGCAGGTTCTTGCCCAGCTGGCCCAGCTGACCATCCCCAGCAACTTCACCGCGCTCTCCTTCTTCGTGGGATTCATGGACTCCCACCGGGACGTCATCCCTGACTATGAAGCCCTCGTGGGGCCCCTGCACAGCCTCCTCAAGCAGAAGCCGGGCTGGCAGTGGGACTGGGAGCACGAGAAGGCCTTCCTGGCCCTGAAGCGAGCTCTGGTGTCCGCCCTCTGCCTGACGGCCCCCAACCCCCAGCTGCCCTTCCGCCTGGAGGTGACGGTGAGCCAAGTGGCCCTGACGGCTGTTGTGTACCAGGAGCGCTCAGGGAGAAAGCACCCCGTAGCCTATACCTCGAAACCCCTCCTCCCCGACGAGGAGAGCGAGGGCCCGCAGTCAGGGGGAGACAGCCCCTATGCCATGGCCTGGGCCCTCAAGCACTTTTCCCGCTGCATTGGAGACACCCCAGTGGTCCTGGGCCTTTCCTATGCCTCCCGGACCACTGTGGACCCTGGGGCATGGGACGGCCGCAGGGTTGCCAAAGCATGGTTGATCAGATGGTCCCTCTTGGTACAGGACAAGGGCAAGAGGGCACTGGAATTGACCCTTCTCCAGGGCCTGCTAGGGGAAAACCGGCTGCTGACTCCTGCGGCTTCCATGCCTCGTTTTTTCCAGGTTCTGCCTCCTTTTTCTGACCTGTCCACTTTTGTCTGCATCCACATGTCGGGGTATTGCTTTTACCGGGAGGATGAGTGGTGTGCTGGCTTCGGTCTCTATGTTCTGTCTCCCACCAGCCCCCCTGTCTCCCTTTCCTTCTCTTGCTCCCCTTACACCCCGACCTATGCCCACCTGGCGGCCGTGGCCTGTGGCCTGGAGCGCTTTGGCCAGTCCCACCTGCCCGTGGTTTTCCTCACGCACTGCAACTGGATCTTCAGCCTCCTCTGGGAGCTCCTGCCCCTCTGGAGGGCTCGGGGCTTCCTCTCCTCCGACGGGGCTCTGCTACCTCACCCAAGCCTGCTCTCCTACATCATAGCCCTCACCTCCGGCCTCTCATCCCTTCCATTTATCTACCGAACCTCCTACCGGGGCTCCCTGTTTGCTGTGACGGTGGACACCCTGGCCAAGCAGGGTGCCCAGGGGGGCGGCCAGTGGTGGAATTTGCCAAACGATGTTCCCGTCCCTGTAGTGTCTCCCCGTACCACGGGCAAGAGGCCCAACTTGCTGGCATTACAGCTGAGCGACAGCACCCTGGCTGATATCATTGCCAAGCTGCAGGCCGGGCAGAAATTATCCAGCTCCTCACCCTTCAGTTCTGCCTTTAACTCCCTCAGCCTCGACAAGGAGAGCGGCCTGCTTATGTTCAAGGGAGACAGGAGGCCCCGGATCTGGGTAGTCCCGAGGCAGCTCCGGAGGGATCTGATTTTCGCTGTGCACGACCTCCCCATGGGGGCCCACCAGAGGCCCGAGGAGACCTACAAGAAGCTGCGGTTGCTGGGATGGTGGCCGGGCATGCAGGAGCACGTGAGAGATTACTGTAGGAGCTGCTTGTTCTGCATCCCCCGGAATCTCGTAGGCAGTGAGTTGAAGGTTATTGAGTCCCTGTGGCCCCTCAGGTCCACCGCCCCCTGGTCCCACCTGCAGATCGAGGTGGTGGGCCCAGTCAGTGTCAGCGAGGAGGGCCACAAGCACGTGCTGATTGTGGCTGACCCCAACACCAGGTGGGTAGAGGCATTCCCGCTGAAGCCCTACACGCACATGGCCGTGGCCCAGGTGCTGCTTCAGCACGTGTTCGCGAGGTGGGGTGTTCCGGTGAGGCTGGAGGCCGCCCAGGGCCCCCAGTTTGCCCGCCATGTCCTGGTAAGCTGTGGGCTGGCCCTGGGAGCCCAGGTGGCCTCCTTGAGTAGAGACCTCCAGTTCCCCTGCCTGACGAGCTCCGGGGCCTACTGGGAATTCAAGAGGGCCCTCAAAGAGTTCATCTTCCTGCACGGCAAGAAGTGGGCAGCGTCCCTGCCCTTGCTGCACCTGGCCTTCAGGGCCTCCTCCAGCCAGGCCACGCCGTTCCAGATCCTGACGGGGGGCGAGGAGAGGCTGACCGAGCCCCTGTGGTGGGAGGTGAGCAGTGCAAACATCGAAGGCCTCAAGATGGATGTCTTCCTGCTACAGCTGATGGGGGAGCTGCTGGAGCTCCACTGGAGGGTGGCTGAGAAGACGAGTGAAAAGGCTGAGAACAGGCGTTTCAAGCGGGAGAGCCAGGAGAAGGAGTGGAATGTGGGCGACCAGGTCCTCTTGCTGTCCCTCCCCAGGAACGGTAGCAGTGCCAAGTGGGTGGGTCCCTTCTATATCGGGGACCGGCTGAGCCTGTCCCTCTACAGGGTCTGGGGCTTCCCCACCCCAGAGAAGCTTGGGTGCATCTATCCTAGCAGTCTGATGAAGACCTTTGCCAAGAGTGGCACCCCCCTGTCCTTCAAGGTCTTGGAGCAGTGA

Related Sequences

bmy_16953T0 Protein

Length: 2058 aa      View alignments
>bmy_16953T0
ARRREEGAWLRRLRPGDPGGTVGSLLPGAGGPAMLLSGGDPPAQEWFMVQTKSKPRVQRQRLQVQRIFRVKLNAFQSRPDTPYFWLQLEGPRENMGRAKEYLKGLCSPELWKEVRYPAALHCAFLGAQGLFLDCLCWSTLAYLVPGPPGSLMVGGLTESFIMTQNWLEELVGRLRWGPAPLLTPRGIWEAEVTRAFGALVWIRGDQYAGDLLQLPAAVQELLLSLVRDAAGKEDIIQWLGCIGTSDSRSDPELLICPTHQQKEGPAMVSMGDGPGPFLEMGSPENSKRLTSLGAMGALIPGQNAQLETANQLVRVGSNNQGGTDSACEEGSVQASSSQDPADRTQASSQQRQARRGEDKLPLQPPVSALSVCSPWKSWTPGPAFGPLWPGTIAATFWRINELHSLHLAWLLSQACFSFPFWQRPLGPIQFKLPGQNPLPLNLGWKQKELVPLPSVESPDCRPDGGPGGEAALQNCPRPETPKKVMSLLVVSGGSGVKDKASPGLPQIGPPLTSTPQLQAGSEPGDRGNMQWDCKEPEERPFPGPSTGQGVPTARGRPATQGGLTAPSGPEPQTVPETLKVPMAAAVPTAQTPPTNPVLPEAPKVPETQTMPAVHEEPAAPKVPLAPTKPAAQVVPTAQKAAVGELAPAAQMVPAAPKTPTTLKRHAAKTSPAGPQTPRAQTGTTAKTGSAAPKXAPSGPEPQTVPETLKVPMAAAVPTAQTPPTNLVLPEAPKVPETQTMPAVHEEPAAPKVPLAPTKPAAQVVLTAQKAAVGELAPATQMVPAAPKTPTTPKRHAAKTSPAGPQTPRAQTGTTAKTGSAAPKAPAAPKAPAAPXTSRALKMPAAQKAPTDPGPTLDAAKFXSEGQPSSRGSASFLKGQGEAGRQGPQSSGTLAPSSKRQPQVEGLLGAWEGVPRQPPRHPQANSTVTSFQRYHEALNTPFELNLSEEPGNQGLRRVVIDGSSVAMVHGLQHFFSCRGIAMAVQYFWNRGHREVTVFVPTWQLKKNRRVRESHFLTKLHSLKMLSITPSQLENGKKITTYDYRFMVKLAEETDGIIVTNEQLHVLMNNSKKLMVKDRLLPFTFAGNLFMVPDDPLGRDGPTLDEFLKKPNRLDTDIGNFLKVWKTLPPSSASVSELSEDADPGPPESPQNVEEVREEREERQDEEQEMQKPAEKEDDLDSSLMSVFRAECSSLSEEILRCLSLHDPQDEALDIDLLPAVPSPSLGIPWDGKAPCQQVLAQLAQLTIPSNFTALSFFVGFMDSHRDVIPDYEALVGPLHSLLKQKPGWQWDWEHEKAFLALKRALVSALCLTAPNPQLPFRLEVTVSQVALTAVVYQERSGRKHPVAYTSKPLLPDEESEGPQSGGDSPYAMAWALKHFSRCIGDTPVVLGLSYASRTTVDPGAWDGRRVAKAWLIRWSLLVQDKGKRALELTLLQGLLGENRLLTPAASMPRFFQVLPPFSDLSTFVCIHMSGYCFYREDEWCAGFGLYVLSPTSPPVSLSFSCSPYTPTYAHLAAVACGLERFGQSHLPVVFLTHCNWIFSLLWELLPLWRARGFLSSDGALLPHPSLLSYIIALTSGLSSLPFIYRTSYRGSLFAVTVDTLAKQGAQGGGQWWNLPNDVPVPVVSPRTTGKRPNLLALQLSDSTLADIIAKLQAGQKLSSSSPFSSAFNSLSLDKESGLLMFKGDRRPRIWVVPRQLRRDLIFAVHDLPMGAHQRPEETYKKLRLLGWWPGMQEHVRDYCRSCLFCIPRNLVGSELKVIESLWPLRSTAPWSHLQIEVVGPVSVSEEGHKHVLIVADPNTRWVEAFPLKPYTHMAVAQVLLQHVFARWGVPVRLEAAQGPQFARHVLVSCGLALGAQVASLSRDLQFPCLTSSGAYWEFKRALKEFIFLHGKKWAASLPLLHLAFRASSSQATPFQILTGGEERLTEPLWWEVSSANIEGLKMDVFLLQLMGELLELHWRVAEKTSEKAENRRFKRESQEKEWNVGDQVLLLSLPRNGSSAKWVGPFYIGDRLSLSLYRVWGFPTPEKLGCIYPSSLMKTFAKSGTPLSFKVLEQ*