Part of scaffold_1412 (Scaffold)

For more information consult the page for scaffold_1412 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHMP4A ENSTTRG00000008629 (Bottlenosed dolphin)

Gene Details

charged multivesicular body protein 4A

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008180, Bottlenosed dolphin)

Protein Percentage 99.48%
cDNA percentage 98.96%
Ka/Ks Ratio 0.03691 (Ka = 0.0021, Ks = 0.056)

CHMP4A ENSBTAG00000039415 (Cow)

Gene Details

Charged multivesicular body protein 4a

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008352, Cow)

Protein Percentage 95.75%
cDNA percentage 95.6%
Ka/Ks Ratio 0.19045 (Ka = 0.0211, Ks = 0.1106)

CHMP4A  (Minke Whale)

Gene Details

charged multivesicular body protein 4A

External Links

Gene match (Identifier: BACU008675, Minke Whale)

Protein Percentage 95.75%
cDNA percentage 96.54%
Ka/Ks Ratio 0.49535 (Ka = 0.0291, Ks = 0.0588)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 639 bp    Location:230583..238662   Strand:+
>bmy_16969
ATGAGTGGGCTCGGCCGGCTCTTCGGGAGGGAGGCAATACAGAAACTGAAGGAGACGGAGAAGATATTGATCAAGAAACAGGAATTTCTGGAGCAGAAGATTGAACAGGAGCTACAAACTGCCAAGAAGCATGGGACCAAGAATAAGAGAGCCGCCCTACAGGCTTTGCGGAGGAAGAAAAGGTTGGAACAGCAGCTGGCACAAACCGACGGGACATTATCCACCCTGGAGTTTCAGCGTGAGGCCATTGAGAATGCCACCACCAACGCAGAAGTGCTTCGTACCATGGAGCTTGCTGCCCAAGGCATGAAGAAGGCCTACCAGGACATGGACATTGACAAGGTGGATGAACTGATGGCTGACATCACAGAACAACAGGAGGTGGCCCAGCAGATCTCAGATGCCATTTCTCGACCCGTGGGATTTGGAGACGATGTGGATGAGGATGAACTGTTGGAGGAGCTAGAGGAGCTGGAGCAGGAGGAATTGGCCCGAGAGTTGTTACATGTGGGCGACAAGGAGGAGGAACCCCCAGTCACACTGCCCAGTGTACCCTCTACACATCTTCCTGCAGGGCCAGCTCCCAAAACGGATGAAGATGAAGAAGCACTAAAGCAGTTGGCTGAGTGGGTGTCCTGA

Related Sequences

bmy_16969T0 Protein

Length: 213 aa      View alignments
>bmy_16969T0
MSGLGRLFGREAIQKLKETEKILIKKQEFLEQKIEQELQTAKKHGTKNKRAALQALRRKKRLEQQLAQTDGTLSTLEFQREAIENATTNAEVLRTMELAAQGMKKAYQDMDIDKVDELMADITEQQEVAQQISDAISRPVGFGDDVDEDELLEELEELEQEELARELLHVGDKEEEPPVTLPSVPSTHLPAGPAPKTDEDEEALKQLAEWVS*