Sequence detailsbmy_16973 (Coding sequence)

Part of scaffold_1412 (SequenceType object (1))

For more information consult the page for scaffold_1412 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000008623 (Bottlenosed dolphin)

Gene Details

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008174, Bottlenosed dolphin)

Protein Percentage 93.28%
cDNA percentage 94.09%
Ka/Ks Ratio 0.43712 (Ka = 0.0151, Ks = 0.0346)

BT.43766ENSBTAG00000005815 (Cow)

Gene Details

RING finger protein 31

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000053642, Cow)

Protein Percentage 92.8%
cDNA percentage 93.24%
Ka/Ks Ratio 0.22696 (Ka = 0.0381, Ks = 0.1681)

RNF31 (Minke Whale)

Gene Details

ring finger protein 31

External Links

Gene match (Identifier: BACU008671, Minke Whale)

Protein Percentage 99.44%
cDNA percentage 99.31%
Ka/Ks Ratio 0.24653 (Ka = 0.0033, Ks = 0.0133)

Additional orthologs identified in other species via the OPTIC pipeline.

RNF31 (Human)   Rnf31 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3504 bp    Location:287343..274343   Strand:-
Raw sequence 
>bmy_16973
CTGGCGTTGGGCCCGGGGCCGAAGAGTGACCGTACGCTGAGTGACCCGGGGCGTCCGAGCCGACCGGGTCGGGCCGTGAAGCCAGACCCCAGGCGCTCCTGGCGGCGCTTGGGCCGCGCACAGCCTGAGCCGGGTCCCGTCGGGCAGCGGACTGGGGCTGACTCTTGTCTCAGGATGCCGGGGGAGGAGGAGGAGCGGGCCTTCCTGGCGGCCCGCGAGGAGCTGGCGAGCGCCCTGAGGAGGGATTCCGGGCAGGCGTTTTCGCTGGAGCAGCTCCGGCCGCTACTGGTCACCTCTCTGCCGCCAGCAGCCCGCTACCTGCAGCTGGATGCTGCACGCCTGGTCCGCTGCAACGCTCATGGGGAGCCCCGAAACTACCTCAACACCCTCTCCACGGCCCTGAACATCCTGGAGAAATATGGCCGCAACCTCCTCAGCCCTCAGCGGCCCCGGTACTGGCGCGGGGTCAAGTTTAATAACCCTGTCTTTCGCAGTACGGTGGATGCTGTTCAGGGGGGCCGGGATGTTCTGCGATTGTATGGCTACACAGAGGAGCAGCCAGATGGGTTGAGCTTCCCTGAGGGCCAGAAGGAGCCGGATGAGCGACAAGTTGCTACAGTCACACTGGAAGTACTGCTGCTTCGGACAGAGCTCAGCCTGCTGTTACAGAATACTCATCCAGAACCACAAACACTGGAGCAGCTGCTGAAAGACAAGGTTGAAGATGATATACTGCAGCTCTCAGAGTTTGCCCCCTTACTGAGAGAGATTGCTCCTGACCCCCTCACCACACCCTCTGCCCCAGCCTCCATTCCTGGTCCCTGCTTCCTCTGTGGTTCTGCCCCAGGCACATTGCACTGCTCAGCTTGTAAACAGGCCTTGTGCCCAACTTGTGATCGCCTCTTCCATGGACACCCAGACCGTGCACATCACCTCCGCCAGACCCTGCCTGGGGCCCCCCAGGCTACCCACCTGACCCCCAGCTTACCTGCCTCAGCTCCACCATGGCCTCAGTCAACCTCCCTGCTGGCCCTGGGAGACAGCTCTCTTTCTTCCCCTGATCCTGCAAGTGCCCGTCTTCCCTGGCACTGTTCTGCCTGCGCCATGCTGAATGAACCTTGGGCAGTACTCTGTGTGGCCTGTGATCGGCCCCGAGGCTGTAAAGGGTTGGGGCTGGGGATTGAGGGTCCCCAAGGAGCTGGGGGCCTAGAACCCGAGCTTGCACGGGGTCACTGGGCCTGCCAGAGCTGCACCTTTGAGAATGAGGCTGCGGCTGTGCTGTGTGCCATATGTGAGCGACCTCGGCTGGCTCAGCCTCCYAGCTTGGTAGTGGATTCTCAGGATGCTGGCGTTTGCCTACAGCCCCTTCAGCAGGAGGATACTTTGCTCTCCTCTGCCCAGACTCCAGTGTGGTACTGTATTCACTGTACCTTCTGCAACTCGGGCCCTGGCTGGGTGTGTGCTATGTGCAACCGGACCAGCAGCCCCATCCCAGTACAGCGTACCCCCCGGCCCCTTGCCAGCTCTTTGGAAGAGCGACTCCCTGAACCAGGGCCTCCACGACGCCTCAGTGCCCCCCTGGCCAGTTCCTGTGGGGACCTTGAGAAGCAACGCCAAGACAAGATGCGGGAGGAAGGTCTCCAACTAGTGCTCAAGATCCGGGAAGGGGAAGCCGGAGGCGCCTGTCCAGAGGAGGTCTTCTCAGCTCTGCAGTACTCGGGCACCGAGGTGCCCCTGCAGTGGCTGCGCTCAGAGCTGCCCTACGTGCTGGAGATGGTGGCTGAGCTGGCTGGACAGCAGGACCCGAGGCTGGGTGCCTTTTCCTGTCAGGAGGCCCGGAATGCCTGGCTGGATCGTCACGGCAACCTGGATGAAGCTGTGGAAGAGTGTGTGAGGGCCCGGCGGAGGAAGGTGCAGGAGCTCCGGTCCCTGGGCTTTGAGCCTGAGGAGGGGTCTCTTCAAGCCTTGTTCCAACACGGGGGTGACGTGGCACGAGCCCTGACTGAGCTACAGCGCCAGCGCCTAGAGCCCTTCCATCAGCGCCTCTGGGACAGTGGTCCTGAGCCCACCCCTTCCTGGGATGGGCCAGATAAGCAGAGCCTGGTCAGACGGCTTTTGGCAGTCCACGCACTCCCCAGCTGGGGCCGGGCGGAGCTGGCACTGGCGCTACTGCAGGARACACCCAGGAACTATGAGTTGGGGGACGTGGTAGAAGCTGTGAGGCAGAGCCAGGACCGGGCCTTCCTGCGCCGCTTGCTTGCCCAGGAGTGTGCCGTGTGCAGCTGGGCCCTGCCCCGCAACCGGATGCAGGCTCTGACCTCCTGTGAGTGCACTATCTGTCCCGACTGCTTCCGCCAGCACTTCACCATTGCCTTGAAGGAGAAACACATCACAGACATGGTGTGCCCTGCCTGTGGCCGCCCCGACCTCACCGATGACGCACAGCTGCTCAGCTACTTTTCCACCCTTGATATCCAGCTTCGAGAGAGCCTAGAGCCAGATGCCTATGCGCTGTTCCACAAGAAGCTGACTGAGGGCGTGCTCATGCGAGATCCCAAGTTCTTGTGGTGTGCCCAGTGCTCCTTTGGCTTCATATACGAGCGTGAGCAGCTGGAGGCAACATGTCCCCAGTGTCACCAGACCTTCTGCGTGCGCTGTAAGCGCCAGTGGGAGGAGCAGCATCGAGGCCGGAGCTGTGAAGATTTCCAGAACTGGAAACGCACCAATGACCCGGAATACCAGGCCCAGGGCTTGGCGATGTACCTTCAGGAAAATGGCATAGACTGCCCCAAGTGCAAGTTCTCGTACGCACTGGCCCGAGGAGGCTGCATGCACTTTCACTGCACCCAGTGCCGCCACCAGTTCTGCAGTGGCTGCTACAATGCCTTTTACGCCAAGAATACCCTCCAATGTCTCATCTCCCCCACCCCTACACCCCTCACGCAGGGGTTCCTGAGAGGCCAGGACCCCAACAGTCTCCAACTTCCCCTCTCCCATCTGGGTTTCCGCCAGAAATGTCCAGACCCTAACTGCAGGGTGAAGAAGTCCCTGCATGGCCACCACCCCCGCGACTGCCTCTTCTACCTGCGGGACTGGACGGCTCTCCGGCTCCAGAAGCTGCTTCAGGACAATAACGTCATGTTCAACACAGAGCCCCCAGCGGGGGCCCGGGCAGTGCCTGGAGGTGGCTGCCGAGTGATGGAGCAGAAAGAAGTTCCCGACGGGTTCCGGGACGAAGCCTGCGGCAAGGAGACTCCTGCTGGCTATGCCGGCCTCTGCCAGGCACACTACAAAGAGTACCTTGTGAGCCTCATCAATGCCCACTCGCTGGACCCAGCCACCCTATATGAGGTGGAGGAGCTGGAGACGGCTGCCGAGCGCTACCTGCATGTGCGCCCACAGCCACTGCCTGGGGAGGATGCCGCCACCTACCACGCCCGCTTGTTACAGAAGCTGATAGAAGAGGTGCCCTTGGGACAGAGTATCCCCCGCAGGAGGAAGTAG

Related Sequences

bmy_16973T0 SequenceType object (3)

Length: 1168 aa      View alignments
>bmy_16973T0
LALGPGPKSDRTLSDPGRPSRPGRAVKPDPRRSWRRLGRAQPEPGPVGQRTGADSCLRMPGEEEERAFLAAREELASALRRDSGQAFSLEQLRPLLVTSLPPAARYLQLDAARLVRCNAHGEPRNYLNTLSTALNILEKYGRNLLSPQRPRYWRGVKFNNPVFRSTVDAVQGGRDVLRLYGYTEEQPDGLSFPEGQKEPDERQVATVTLEVLLLRTELSLLLQNTHPEPQTLEQLLKDKVEDDILQLSEFAPLLREIAPDPLTTPSAPASIPGPCFLCGSAPGTLHCSACKQALCPTCDRLFHGHPDRAHHLRQTLPGAPQATHLTPSLPASAPPWPQSTSLLALGDSSLSSPDPASARLPWHCSACAMLNEPWAVLCVACDRPRGCKGLGLGIEGPQGAGGLEPELARGHWACQSCTFENEAAAVLCAICERPRLAQPPSLVVDSQDAGVCLQPLQQEDTLLSSAQTPVWYCIHCTFCNSGPGWVCAMCNRTSSPIPVQRTPRPLASSLEERLPEPGPPRRLSAPLASSCGDLEKQRQDKMREEGLQLVLKIREGEAGGACPEEVFSALQYSGTEVPLQWLRSELPYVLEMVAELAGQQDPRLGAFSCQEARNAWLDRHGNLDEAVEECVRARRRKVQELRSLGFEPEEGSLQALFQHGGDVARALTELQRQRLEPFHQRLWDSGPEPTPSWDGPDKQSLVRRLLAVHALPSWGRAELALALLQETPRNYELGDVVEAVRQSQDRAFLRRLLAQECAVCSWALPRNRMQALTSCECTICPDCFRQHFTIALKEKHITDMVCPACGRPDLTDDAQLLSYFSTLDIQLRESLEPDAYALFHKKLTEGVLMRDPKFLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRTNDPEYQAQGLAMYLQENGIDCPKCKFSYALARGGCMHFHCTQCRHQFCSGCYNAFYAKNTLQCLISPTPTPLTQGFLRGQDPNSLQLPLSHLGFRQKCPDPNCRVKKSLHGHHPRDCLFYLRDWTALRLQKLLQDNNVMFNTEPPAGARAVPGGGCRVMEQKEVPDGFRDEACGKETPAGYAGLCQAHYKEYLVSLINAHSLDPATLYEVEELETAAERYLHVRPQPLPGEDAATYHARLLQKLIEEVPLGQSIPRRRK*