Sequence detailsbmy_16978 (Coding sequence)

Part of scaffold_1412 (SequenceType object (1))

For more information consult the page for scaffold_1412 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DCAF11ENSTTRG00000008618 (Bottlenosed dolphin)

Gene Details

DDB1 and CUL4 associated factor 11

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008169, Bottlenosed dolphin)

Protein Percentage 99.44%
cDNA percentage 99.01%
Ka/Ks Ratio 0.08406 (Ka = 0.0026, Ks = 0.0309)

BT.85442ENSBTAG00000021392 (Cow)

Gene Details

DDB1- and CUL4-associated factor 11

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000028515, Cow)

Protein Percentage 98.14%
cDNA percentage 96.16%
Ka/Ks Ratio 0.06268 (Ka = 0.0086, Ks = 0.1373)

DCAF11 (Minke Whale)

Gene Details

DDB1 and CUL4 associated factor 11

External Links

Gene match (Identifier: BACU008667, Minke Whale)

Protein Percentage 99.81%
cDNA percentage 99.63%
Ka/Ks Ratio 0.07429 (Ka = 0.0009, Ks = 0.0116)

Additional orthologs identified in other species via the OPTIC pipeline.

DCAF11 (Human)   Dcaf11 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1617 bp    Location:312197..303361   Strand:-
Raw sequence 
>bmy_16978
ATGGGATCACGGAACAGCAGCAGCGCAGGAACTGGGTCCGGAGACCCCTCTGAGGGCTTGCCCCGAAGAGGGACTGGCCTGCGTAGGAGTGAGGAAGAGGAAGAGGAGGATGAAGATGTGGATCTGGCCCAGGTACTGGCCTATCTCCTACGCAGAGGCCAAGTGAGGTTGGTGCAGGGAGGAGGTGCAGCAAATTTACAGCTCATCCAGGCCCTCTCGGACTCGGAGGAAGAGCATGACAGTGCCTGGGATGGTCGTCTTGGAGACCGATACAACCCACCCGTGGATGCAACCCCTGACACCCGGGAGCTGGAATGCAATGAGATCAAGACACAAGTGGAATTGGCCACAGGGCGGCTGGGGCTTAGGCGGGCAGCCCGGGAGCACAGCTTTCCTCAAATGCTGCACCAGAGAGAACGGGGCCTCTGCCACCAGGGAAGCTTCTCCCTTGGAGAACGGTCTCGAATGATGTCTCACTTCTTGCCCAATGATCTGGGCTTCACTGATACCTACTCTCAGAAGGCTTTCTGTGGCATCTACAGCAAAGATGGTCAAATCTTCATGTCTGCTTGCCAAGACCAGACAATCCGACTGTATGACTGCCGGTATGGCCGCTTTCATAAATTCAAGAGCATCAAGGCCCGGGATGTAGGCTGGAGCGTCTTGGATGTGGCCTTCACCCCTGATGGGAACCATTTCCTTTACTCCAGCTGGTCTGATTACATTCATATCTGCAACATCTACGGGGAGGGAGACACACATACTGCCCTGGATCTAAGGCCAGATGAGCGTCGCTTTGCTGTCTTCTCCATCACTGTCTCCTCAGATGGGCGAGAAGTGCTAGGAGGGGCCAATGATGGCTGCCTGTACGTCTTTGATCGAGAACAGAACCGACGTACCCTTCAGATTGAGTCCCATGAGGATGATGTGAATGCGGTGGCCTTTGCTGACATCAGCTCCCAAATCCTGTTCTCCGGGGGTGACGATGCCATCTGCAAAGTGTGGGATCGACGCACCATGCGGGAGGATGACCCCAAGCCCGTGGGTGCGCTGGCTGGACATCAAGACGGCATCACCTTCATTGACAGCAAGGGAGATGCCCGGTATCTCATCTCCAACTCCAAAGACCAGACCATCAAGCTCTGGGATATCCGACGCTTTTCTAGCCGGGAAGGCATGGAAGCCTCTCGCCAGGCTGCCACACAGCAAAACTGGGACTACCGCTGGCAGCAGCTGAAGCTCCCAGGGGACAGCTCCTTGATGACCTACCGGGGCCATGGGGTGCTGCATACCCTCATCCGCTGCCGATTCTCTCCCACCCATAGCACCGGCCAGCAATTCATCTACAGTGGCTGCTCCACTGGCAAAGTGGTCGTGTACGACCTCCTCAGCGGCCACATCGTGAAGAAGCTGACCAACCACAAGGCCTGTGTGCGTGACGTCAGCTGGCACCCCTACGAGGAGAAGATTGTCAGCAGTTCGTGGGACGGGAACCTGCGTCTGTGGCAGTACCGCCAGGCTGAGTACTTCCAGGATGACATGCCAGAGTCTGAGGAACACCTGAGCACCCCTGCCCCAATGTCCCACCCCTCTACAGCCTTTTCCTCGCCCCAGTAG

Related Sequences

bmy_16978T0 SequenceType object (3)

Length: 539 aa      View alignments
>bmy_16978T0
MGSRNSSSAGTGSGDPSEGLPRRGTGLRRSEEEEEEDEDVDLAQVLAYLLRRGQVRLVQGGGAANLQLIQALSDSEEEHDSAWDGRLGDRYNPPVDATPDTRELECNEIKTQVELATGRLGLRRAAREHSFPQMLHQRERGLCHQGSFSLGERSRMMSHFLPNDLGFTDTYSQKAFCGIYSKDGQIFMSACQDQTIRLYDCRYGRFHKFKSIKARDVGWSVLDVAFTPDGNHFLYSSWSDYIHICNIYGEGDTHTALDLRPDERRFAVFSITVSSDGREVLGGANDGCLYVFDREQNRRTLQIESHEDDVNAVAFADISSQILFSGGDDAICKVWDRRTMREDDPKPVGALAGHQDGITFIDSKGDARYLISNSKDQTIKLWDIRRFSSREGMEASRQAATQQNWDYRWQQLKLPGDSSLMTYRGHGVLHTLIRCRFSPTHSTGQQFIYSGCSTGKVVVYDLLSGHIVKKLTNHKACVRDVSWHPYEEKIVSSSWDGNLRLWQYRQAEYFQDDMPESEEHLSTPAPMSHPSTAFSSPQ*