Part of scaffold_1412 (Scaffold)

For more information consult the page for scaffold_1412 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CPNE6 ENSTTRG00000008615 (Bottlenosed dolphin)

Gene Details

copine VI (neuronal)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008166, Bottlenosed dolphin)

Protein Percentage 99.28%
cDNA percentage 98.62%
Ka/Ks Ratio 0.04224 (Ka = 0.0029, Ks = 0.0696)

CPNE6 ENSBTAG00000001870 (Cow)

Gene Details

Copine-6

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002436, Cow)

Protein Percentage 97.31%
cDNA percentage 94.85%
Ka/Ks Ratio 0.03945 (Ka = 0.0113, Ks = 0.2861)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1923 bp    Location:351316..344779   Strand:-
>bmy_16981
ATGTCCGGCCCGGAGATGGCATGGGTGCCTGAGCCCCCAGCCATGACGCTGGGGGCCTCGAGAGTGGAGCTGCGGGTGTCCTGCCACGGCCTCCTAGACCGAGACACGCTCACCAAGCCTCACCCCTGTGTGCTGCTCAAACTCCACTCCGATGAGCAGTGGGTGGAGGCGGAGCGCACAGAGGTGTTGCGCTCCTGCTCCAGCCCTGTCTTCTCCCGGGTGCTGGCCCTCGAGTACTTCTTTGAGGAGAAGCAGCCCCTGCAGTTCCACGTGTTTGACGCCGAGGACGGAGCCACCAGCCCCCGCAATGACACCTTCCTCGGCTCTACCGAGTGCACCTTGGGCCAGGTTGTGTCACAGACCAAGGTCACTAAGCCACTGCTACTGAAGAACGGGAAGAACGCGGGCAAGTCCACCATCACGATCGTGGCCGAAGAGGTATCTGGCACCAATGACTATGTGCAGCTCACCTTCAGAGCCCACAAGCTGGACAACAAGGTTGGAAACCCAGAGTCCAGGTCCCCATCTCTACTGTTAGGGAGCCTAGCCCCCCTATTCAGGACAAATCCCAGGTCCCAGCGCTGCTCCCTTCTTGGTGTTAGCCACCTCCCCCTCAGACCTCACCAGGCTCATGGACGCTTTCCCCCGTGTCCCCAGGATCTGTTCAGCAAGTCTGACCCTTTCATGGAGATCTATAAGACCAATGGGGACCAGAGCGACCAGCTGGTCTGGAGGACAGAGGTTGGTGCCTGGGGCTGGGGGGAAGGAGGGAGGAAGGGGAGAGCAGGGGAAACTAGATCAGGGGTGACCAGCTCTCTGTGCCTCTTCAAGGTGGTGAAGAACAATCTGAACCCCAGCTGGGAGCCGTTCCGTCTGTCCCTGCACTCCCTGTGCAGCTGCGATGTCCACCGGCCTCTCAAGTTCCTGGTGTATGACTATGACTCCAGTGGGAAGCATGACTTCATCGGCGAGTTCACCAGCACCTTCCAGGAGATGCAGGAAGGAACAGCAAACCCTGGGCAGGAGATGCAGTGGGACTGTATCAACCCCAAGTACCGGGACAAGAAGAAGAATTACAAGAGCTCAGGGACCGTAGTGCTGGCCCAATGCACGGTGGAGAAGGTGCACACCTTCCTGGATTACATCATGGGTGGCTGCCAGATCAACTTCACGGTGGCCATTGACTTCACCGCCTCCAATGGGGACCCGAGGAGCAGCCAGTCCCTGCACTGCCTGAGCCCCCGCCAGCCCAACCACTACCTGCAGGCCCTGCGTGCAGTGGGAGGCATCTGCCAGGACTACGACAGTGACAAACGGTTCCCAGCGTTTGGCTTTGGGGCTCGAATCCCCCCCAACTTTGAGGTGTCCCATGACTTTGCTATCAACTTTGACCCGGAAAATCCTGAATGTGAAGAGATCTCGGGGGTCATCACCTCCTATCGCCGTTGCCTGCCCCAGATCCAGCTCTATGGCCCCACCAACGTGGCCCCCATCATCAACCGCGTGGCGGGGCCAGCCCAGCGGGAGCAGAGCACTGGCCAAGCCACGAAGTACTCGGTGCTGCTGGTGCTCACGGACGGTGTGGTGAGCGACATGGCCGAGACCCGCGCCGCCATCGTGCGCGCCTCCCGCCTGCCCATGTCCATCATCATCGTGGGCGTGGGCAACGCCGATTTCTCCGACATGCGGCTGCTGGACGGCGATGACGGTCCACTGCGCTGCCCCCGAGGGGTGCCCGCGGCTCGCGACATCGTCCAGTTCGTGCCCTTCCGGGACTTCAAGGACGCCGCACCCTCTGCGCTAGCTAAGTGCGTCCTGGCCGAGGTGCCCCGGCAGGTGGTGGAGTACTACGCCAGCCAGGGCATCAGCCCCGGGCCTCCCAGGTCCTGCACGCCAGGCACGACGCCCAGCCCTAGCCTGTGA

Related Sequences

bmy_16981T0 Protein

Length: 641 aa      View alignments
>bmy_16981T0
MSGPEMAWVPEPPAMTLGASRVELRVSCHGLLDRDTLTKPHPCVLLKLHSDEQWVEAERTEVLRSCSSPVFSRVLALEYFFEEKQPLQFHVFDAEDGATSPRNDTFLGSTECTLGQVVSQTKVTKPLLLKNGKNAGKSTITIVAEEVSGTNDYVQLTFRAHKLDNKVGNPESRSPSLLLGSLAPLFRTNPRSQRCSLLGVSHLPLRPHQAHGRFPPCPQDLFSKSDPFMEIYKTNGDQSDQLVWRTEVGAWGWGEGGRKGRAGETRSGVTSSLCLFKVVKNNLNPSWEPFRLSLHSLCSCDVHRPLKFLVYDYDSSGKHDFIGEFTSTFQEMQEGTANPGQEMQWDCINPKYRDKKKNYKSSGTVVLAQCTVEKVHTFLDYIMGGCQINFTVAIDFTASNGDPRSSQSLHCLSPRQPNHYLQALRAVGGICQDYDSDKRFPAFGFGARIPPNFEVSHDFAINFDPENPECEEISGVITSYRRCLPQIQLYGPTNVAPIINRVAGPAQREQSTGQATKYSVLLVLTDGVVSDMAETRAAIVRASRLPMSIIIVGVGNADFSDMRLLDGDDGPLRCPRGVPAARDIVQFVPFRDFKDAAPSALAKCVLAEVPRQVVEYYASQGISPGPPRSCTPGTTPSPSL*