Part of scaffold_1417 (Scaffold)

For more information consult the page for scaffold_1417 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BT.102766 ENSBTAG00000047810 (Cow)

Gene Details

coiled-coil domain-containing protein 96

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000056012, Cow)

Protein Percentage 83.55%
cDNA percentage 86.12%
Ka/Ks Ratio 0.12871 (Ka = 0.0865, Ks = 0.672)

CCDC96  (Minke Whale)

Gene Details

coiled-coil domain containing 96

External Links

Gene match (Identifier: BACU004157, Minke Whale)

Protein Percentage 96.95%
cDNA percentage 98.08%
Ka/Ks Ratio 0.49255 (Ka = 0.0162, Ks = 0.0328)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1689 bp    Location:276509..274821   Strand:-
>bmy_16997
ATGGACGACTTCTCCGACCACACTGGCGACCCCGAGAAGGAAGATGGAGATGTGGAGAGCCTGGCCTCACGGCTGTCCGGGATCAAAACCAGCTCTGGTCCCCAGTCCCCGGCCGAACCCACGGAGCCGGAGCCGGAGGCCGTAGAGGCTTCAGAGGAAGGCGCCGAGCCGGCCGAGTCCCAGGAACGGCCGGCGGCCACCGAGGTTGCTGGCGAGAAGGCGCCCGGAGAGCCGGAGTGGCCGGCCGAGGCCGAGGCGGAGGCCGAGCCAGGGGACCTGGCGGAGGCCGGGCGTGAGGAGCCAGCCAAGCCGGAGCCCGAAGGCGGCCCCGAGGAACCAGAGAAGGAGGAGTGGGAGGAGGAGGAGTGGGAGGAGGAGGAGGAGGAGGACGAGGACGAGGACGAGGACGAGGAGGAGGCGGAGGTGGCGGCGGAGCCGAGGAGGAAGGAAACCCCGTCGCAGGTCTCTCTGCAGCAGGTCACGGCCGGCAAGGAAGAGGCTGCGCCAGACCGAGAGGCTGAGCGGGAAGGACAGCTGGCGGAGGAAGGAGAAGAGAGCGAGGAGAGCGAGAAGCAGCTTGTGCAAGGAGGCCTGGGGAAGACCGAGGACGAGCTGGGGGATTTGGACGAGGGGCTAGAGCTTGGGAGTTGCGATTGGACTGAGGAGGTGCAGACGCAGCAGGAGCAGCAGCTGCGCGCCGAGCTCCTGGAACAGTACCGCTCCCTGATGGTAGCGCGAGGCCGCTACCAGCGCTACAACATCTACCTGCAGCACAAGATCCTCGAGGCGCTGCGCAAGAAGAAGGGCCTGGATGCAGCCGAGGTGCCCGAGAAGGGCGCGGAGCCTGAGGCCCCCGAGAAAGAGCAAGCATACCTACGCCATCTGGCCATGCTGGAGGATCTGAGGAAGCAGGAGTCAGATGACCTGCGCTGGTACCACCGCGAGCTGGACCAGCTGAAGCAGCAGTGCAAAGAGAAGCTCTCCCGGGCGGAGAAGGAATGGCGACGCTTGCAGGCACTCAAGAAGCAGGTGGTGATGCAGGCCATGGGCAGCTGTCGGACGAGGGGTGGTCGCCAGGCCGCTCTGCGAGAGGTGGAGCAGATCCAGGCGTTGGAGGATAAGAAGGAGAAGGAGATAAGCGCCGTGAGGCTAGAGAACGTGCAGCTGAAGCAGAGTTTGGTGCATTTTGAAAACAGGATGAGGGCCCAGGAGGACCTGACAGAGGGCCTGCTCCTGATAGATTTTGAACAGCTTAAGATTGAGAACCAGACCTTCAATGAGAAAGTCGAGGAGCGAAATGAGGAGCTTTTGAAACTGCGCAGCAAGGTAACCAACAATGTGCAAATAATAACCCATGTGAAGGAAAAGTTACACTTTGTGGTCATAGAAAATGCGTGTAAAAAGTCAGAGCTTATGGAGATTGAGGCTCAGGTGGCCCTAAAGAGGGACATCTTGACCAAGACTAAGCAAGCCCGAGACAGCCTGCGGATTGACAACATCAAGCTGAATCAGAAGTGTGGGCTTCTGGGCAAGGAAGCACTCCTTCGGGACATGGAAGAGAAGGTAGACAGGACTGAAGAGCTCAACCAGCGCTTGGAAGCCCTGAAGCACCATCACGCTGGGCTTATTCTGTCCTGCAGAGGCGTGAAGCAGAAGATCAGGGAGGCCAAAGCCTTTCTGCCTTCTTGA

Related Sequences

bmy_16997T0 Protein

Length: 563 aa      View alignments
>bmy_16997T0
MDDFSDHTGDPEKEDGDVESLASRLSGIKTSSGPQSPAEPTEPEPEAVEASEEGAEPAESQERPAATEVAGEKAPGEPEWPAEAEAEAEPGDLAEAGREEPAKPEPEGGPEEPEKEEWEEEEWEEEEEEDEDEDEDEEEAEVAAEPRRKETPSQVSLQQVTAGKEEAAPDREAEREGQLAEEGEESEESEKQLVQGGLGKTEDELGDLDEGLELGSCDWTEEVQTQQEQQLRAELLEQYRSLMVARGRYQRYNIYLQHKILEALRKKKGLDAAEVPEKGAEPEAPEKEQAYLRHLAMLEDLRKQESDDLRWYHRELDQLKQQCKEKLSRAEKEWRRLQALKKQVVMQAMGSCRTRGGRQAALREVEQIQALEDKKEKEISAVRLENVQLKQSLVHFENRMRAQEDLTEGLLLIDFEQLKIENQTFNEKVEERNEELLKLRSKVTNNVQIITHVKEKLHFVVIENACKKSELMEIEAQVALKRDILTKTKQARDSLRIDNIKLNQKCGLLGKEALLRDMEEKVDRTEELNQRLEALKHHHAGLILSCRGVKQKIREAKAFLPS*