Sequence detailsbmy_16997 (Coding sequence)

Part of scaffold_1417 (SequenceType object (1))

For more information consult the page for scaffold_1417 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BT.102766ENSBTAG00000047810 (Cow)

Gene Details

coiled-coil domain-containing protein 96

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000056012, Cow)

Protein Percentage 83.55%
cDNA percentage 86.12%
Ka/Ks Ratio 0.12871 (Ka = 0.0865, Ks = 0.672)

CCDC96 (Minke Whale)

Gene Details

coiled-coil domain containing 96

External Links

Gene match (Identifier: BACU004157, Minke Whale)

Protein Percentage 96.95%
cDNA percentage 98.08%
Ka/Ks Ratio 0.49255 (Ka = 0.0162, Ks = 0.0328)

Additional orthologs identified in other species via the OPTIC pipeline.

CCDC96 (Human)   Ccdc96 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1689 bp    Location:276509..274821   Strand:-
Raw sequence 
>bmy_16997
ATGGACGACTTCTCCGACCACACTGGCGACCCCGAGAAGGAAGATGGAGATGTGGAGAGCCTGGCCTCACGGCTGTCCGGGATCAAAACCAGCTCTGGTCCCCAGTCCCCGGCCGAACCCACGGAGCCGGAGCCGGAGGCCGTAGAGGCTTCAGAGGAAGGCGCCGAGCCGGCCGAGTCCCAGGAACGGCCGGCGGCCACCGAGGTTGCTGGCGAGAAGGCGCCCGGAGAGCCGGAGTGGCCGGCCGAGGCCGAGGCGGAGGCCGAGCCAGGGGACCTGGCGGAGGCCGGGCGTGAGGAGCCAGCCAAGCCGGAGCCCGAAGGCGGCCCCGAGGAACCAGAGAAGGAGGAGTGGGAGGAGGAGGAGTGGGAGGAGGAGGAGGAGGAGGACGAGGACGAGGACGAGGACGAGGAGGAGGCGGAGGTGGCGGCGGAGCCGAGGAGGAAGGAAACCCCGTCGCAGGTCTCTCTGCAGCAGGTCACGGCCGGCAAGGAAGAGGCTGCGCCAGACCGAGAGGCTGAGCGGGAAGGACAGCTGGCGGAGGAAGGAGAAGAGAGCGAGGAGAGCGAGAAGCAGCTTGTGCAAGGAGGCCTGGGGAAGACCGAGGACGAGCTGGGGGATTTGGACGAGGGGCTAGAGCTTGGGAGTTGCGATTGGACTGAGGAGGTGCAGACGCAGCAGGAGCAGCAGCTGCGCGCCGAGCTCCTGGAACAGTACCGCTCCCTGATGGTAGCGCGAGGCCGCTACCAGCGCTACAACATCTACCTGCAGCACAAGATCCTCGAGGCGCTGCGCAAGAAGAAGGGCCTGGATGCAGCCGAGGTGCCCGAGAAGGGCGCGGAGCCTGAGGCCCCCGAGAAAGAGCAAGCATACCTACGCCATCTGGCCATGCTGGAGGATCTGAGGAAGCAGGAGTCAGATGACCTGCGCTGGTACCACCGCGAGCTGGACCAGCTGAAGCAGCAGTGCAAAGAGAAGCTCTCCCGGGCGGAGAAGGAATGGCGACGCTTGCAGGCACTCAAGAAGCAGGTGGTGATGCAGGCCATGGGCAGCTGTCGGACGAGGGGTGGTCGCCAGGCCGCTCTGCGAGAGGTGGAGCAGATCCAGGCGTTGGAGGATAAGAAGGAGAAGGAGATAAGCGCCGTGAGGCTAGAGAACGTGCAGCTGAAGCAGAGTTTGGTGCATTTTGAAAACAGGATGAGGGCCCAGGAGGACCTGACAGAGGGCCTGCTCCTGATAGATTTTGAACAGCTTAAGATTGAGAACCAGACCTTCAATGAGAAAGTCGAGGAGCGAAATGAGGAGCTTTTGAAACTGCGCAGCAAGGTAACCAACAATGTGCAAATAATAACCCATGTGAAGGAAAAGTTACACTTTGTGGTCATAGAAAATGCGTGTAAAAAGTCAGAGCTTATGGAGATTGAGGCTCAGGTGGCCCTAAAGAGGGACATCTTGACCAAGACTAAGCAAGCCCGAGACAGCCTGCGGATTGACAACATCAAGCTGAATCAGAAGTGTGGGCTTCTGGGCAAGGAAGCACTCCTTCGGGACATGGAAGAGAAGGTAGACAGGACTGAAGAGCTCAACCAGCGCTTGGAAGCCCTGAAGCACCATCACGCTGGGCTTATTCTGTCCTGCAGAGGCGTGAAGCAGAAGATCAGGGAGGCCAAAGCCTTTCTGCCTTCTTGA

Related Sequences

bmy_16997T0 SequenceType object (3)

Length: 563 aa      View alignments
>bmy_16997T0
MDDFSDHTGDPEKEDGDVESLASRLSGIKTSSGPQSPAEPTEPEPEAVEASEEGAEPAESQERPAATEVAGEKAPGEPEWPAEAEAEAEPGDLAEAGREEPAKPEPEGGPEEPEKEEWEEEEWEEEEEEDEDEDEDEEEAEVAAEPRRKETPSQVSLQQVTAGKEEAAPDREAEREGQLAEEGEESEESEKQLVQGGLGKTEDELGDLDEGLELGSCDWTEEVQTQQEQQLRAELLEQYRSLMVARGRYQRYNIYLQHKILEALRKKKGLDAAEVPEKGAEPEAPEKEQAYLRHLAMLEDLRKQESDDLRWYHRELDQLKQQCKEKLSRAEKEWRRLQALKKQVVMQAMGSCRTRGGRQAALREVEQIQALEDKKEKEISAVRLENVQLKQSLVHFENRMRAQEDLTEGLLLIDFEQLKIENQTFNEKVEERNEELLKLRSKVTNNVQIITHVKEKLHFVVIENACKKSELMEIEAQVALKRDILTKTKQARDSLRIDNIKLNQKCGLLGKEALLRDMEEKVDRTEELNQRLEALKHHHAGLILSCRGVKQKIREAKAFLPS*