Part of scaffold_1417 (Scaffold)

For more information consult the page for scaffold_1417 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GRPEL1 ENSTTRG00000015010 (Bottlenosed dolphin)

Gene Details

GrpE-like 1, mitochondrial (E. coli)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014227, Bottlenosed dolphin)

Protein Percentage 93.55%
cDNA percentage 94.93%
Ka/Ks Ratio 0.23651 (Ka = 0.0316, Ks = 0.1334)

GRPEL1 ENSBTAG00000010181 (Cow)

Gene Details

GrpE protein homolog 1, mitochondrial

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013431, Cow)

Protein Percentage 90.78%
cDNA percentage 90.32%
Ka/Ks Ratio 0.09702 (Ka = 0.0421, Ks = 0.4344)

GRPEL1  (Minke Whale)

Gene Details

GrpE-like 1, mitochondrial (E. coli)

External Links

Gene match (Identifier: BACU020272, Minke Whale)

Protein Percentage 96.45%
cDNA percentage 97.12%
Ka/Ks Ratio 0.16138 (Ka = 0.015, Ks = 0.0928)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 687 bp    Location:307348..294041   Strand:-
>bmy_16999
ATGCCCCGGGCGGGCGCAGTGCCGGCGGCAGTGATGGCGGCTCGGTGCGTGAGGGTGGTGCGGCACAATCTCCCGGCTTTGGCGTTGTCTCTCAGGTCCTCTCCTCGGCTGCTGTGCACAGCTACAAAGCAGGAGAACAACGGCCAGAACTTGGAGGAGGACGTGGGTCAGGATGAGCAGAAGACAGATCTGCCGTCTGCAGAGAAGACGCTGCTGGAAGAGAAGGCCAAGCTGGAAGAGCAGCTAAAGGAGACCACGGAAAAATACAAGCGAGCTTTAGCAGATACTGAGAACTTGCGGCAGAGGAGCCAAAAATTGGTGGAGGAGGCGAAACTATATGGCATTCAGGGCTTCTGCAAGGACTTGCTGGAGGTGGCAGACGTTCTGGAGAAGGCGACACAGTGTGTCCCAAAGGAGGAGATTAGAGATGATAACCCGCACCTGAAGAACCTCTACGAGGGGCTCGTGATGACTGAGGTCCAGATCCAGAAGGTGTTCAGGAAGCACGGCTTACTCCGGCTGAACCCTGTGGGGGCCAAGTTCGACCCCTACGAGCACGAGGCCTTGTTCCACACGCCGGTTGAGGGCAAGGAGCCGGGCATGGTGGCGCTCGTTAACAAAGTGGGGTACAAGCTGCACGGGCGCACCCTGAGACCCGCCCTGGTTGGGGTGGTGAAGGCGGCTTAG

Related Sequences

bmy_16999T0 Protein

Length: 229 aa      View alignments
>bmy_16999T0
MPRAGAVPAAVMAARCVRVVRHNLPALALSLRSSPRLLCTATKQENNGQNLEEDVGQDEQKTDLPSAEKTLLEEKAKLEEQLKETTEKYKRALADTENLRQRSQKLVEEAKLYGIQGFCKDLLEVADVLEKATQCVPKEEIRDDNPHLKNLYEGLVMTEVQIQKVFRKHGLLRLNPVGAKFDPYEHEALFHTPVEGKEPGMVALVNKVGYKLHGRTLRPALVGVVKAA*