Sequence details bmy_17004 (Coding sequence)

Part of scaffold_1432 (Scaffold)

For more information consult the page for scaffold_1432 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RAB3GAP2 ENSTTRG00000013033 (Bottlenosed dolphin)

Gene Details

RAB3 GTPase activating protein subunit 2 (non-catalytic)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012370, Bottlenosed dolphin)

Protein Percentage 96.61%
cDNA percentage 96.88%
Ka/Ks Ratio 0.24149 (Ka = 0.0177, Ks = 0.0733)

RAB3GAP2 ENSBTAG00000012585 (Cow)

Gene Details

rab3 GTPase-activating protein non-catalytic subunit

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000045024, Cow)

Protein Percentage 92.81%
cDNA percentage 92.46%
Ka/Ks Ratio 0.19181 (Ka = 0.0385, Ks = 0.2006)

RAB3GAP2  (Minke Whale)

Gene Details

RAB3 GTPase activating protein subunit 2 (non-catalytic)

External Links

Gene match (Identifier: BACU004031, Minke Whale)

Protein Percentage 94.89%
cDNA percentage 95.66%
Ka/Ks Ratio 0.60755 (Ka = 0.0391, Ks = 0.0643)

Additional orthologs identified in other species via the OPTIC pipeline.

RAB3GAP2 (Human)   Rab3gap2 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 2997 bp    Location:14388..111063   Strand:+
Raw sequence 
>bmy_17004
ATGTGGAAAGGGTATCGAGATGCACAGACTGGTTGGATCCAAATTGTAGAGGACCTCCACGAAAGAGTGCCAGAAAAGGTGCACTTTTCCCCCTTTGGAAGTCCTCAGGGTCCAAGTCGAGTAGCTCAGTTCCTTGTGATCTATGCACCGCGGAGGGGCATTTTAGAAGTGTGGAGCACACAGCAGGGCCCTAGAGTCGGTGCTTTCAACGTGGGAAAGCACTGCAGGCTTCTGTATCCTGGCTATAAAATAATGGGCTTAAATAACGTTACCAGTCAGAATTGGCAGCCGCAGACTTACCAGATCTGTCTGGTTGATCCAGTGTCTGGAAGTGTGAAAACAGTAAATGTCCCTTTCCATTTAGCACTGAGTGATAAGAAGAGTGAACGAGCCAAGGACATGCACTTAGTGAAGAAACTGGGAGCCTTACTGAAAGCAAAATCTCCCAATCTTGATTTGATTGAAACAGAAATAAAGGAATTAATTCTCGATATTAAGTACCCTGCAACCAAAAAACAAGCATTGGAAAGCATTTTGGCAAGCATACGTTTACCATTTTCCTGCCTTAGAAACATCACTCAGACTTTAATGGACACTTTAAAAAATCAAGAGCTTGAGTGTGTTGATGAAGGATTGCTACAGTTTTGTGCCAATAAATTGAAATTACTCCATCTTTATGAGTCTGTCAGTCAATTAAATTCCATTGATTTTCATTCAGACACGCCATTCTCTGATAATGACTTGGCTGTGTTACTAAGGCTTGATGAAAAAGAACTCCTTAAGCTCCAGGCGTTATTAGAGAAGTATAAACAAGAGAACAGCAGGACTGCTGTCCGATTTTCTGATGATAAGGATGGTGTGTTGCCTGTCAAAACATTTCTGGAATATTTAGAATATGAGAAAGATGTGATCAACATAAAGAAGATAAGTGAAGAGGACTGTGTGGCTTTAGGCAGTTTCTTTTTTTGGAAGTGTTTATGTGGAGAAAGCTCCACGGAGGATATGTGTCACACTCTGGAGTCAGCTGGACTTAGCCCCCAGCTGTTGTTGTCTCTGCTCCTGAGTGTTTGGCTTTCTAAGGAAAAAGATATTTTGGACAACCCGCAGTCTGTCTGCTGTCTCCATACGATGCTGTACCTCCTGAGCAAGATGAAAGTGGCCGGCGAAGAGACCTGGGATTCCCAGTCAGTGTCCCCTTGGTGGCAGCAGATGCGCACGGCCTGTATTCAGTCTGAGAACAACGGGGCTGCTCTGCTTTCCGCGCACGTCGGGCACGCTGTCGCCGCCCAGCTGTCCAACAACTTGACCGAGAAGAAATTTTCCCAAACAGTTTCGGGTACTGATTCGGAGGCCCTCACTGATTCCTGGGAGGCCCTTTCCCTTGACACTGAGTACTGGAAACTTCTGCTGAAACAGCTGGAGGACTGTCTCCTACTTCAGACTCTGCTTCACAGCAAAGTGAATGCCCCAACCTCCAAAGCATCGTCGCTGCAGGCTGAGCCGCTCCCGAAGCTTTCTGTTAAAAAGCTGTTAGAAGGAGGAAAAGGTGGCATTGCAGACAGTGTAGCCAAGTGGATATTTAAACAGGATGTCAGCCCTGAAGTATTAAAACTGGCTAATAAAGAAAGAGATGCAGAAAACTCAGATGAACCCAAAGAAGGTATTAACAGAGCTTTATCTGAGGTGTCAGAGGTGGAGAAGGACTTGGGAGCCATCCCAGACCTGCTGCACTTGGCCTACAAGCAGTTTCCTTGTAGCCTCGAGCTGGACGTGCTGCACGCACATTGCTGCTGGGAGTACGTTGTTCAGTGGAATAAAGATCCGGAGGAAGCACTTTTTTTTGTTAGGTCAATAGAACACTTGGAGCACATTCTTAATGCACATGTTCAGAATGGCATCGCACTGATGATGTGGAACACATTTTTAGTTAAAAGGTTTTCTGCTGCTACGTACTTGATGGATAAGGTAAGGTTGGAAAAGCACCAAAGGATAGGTTATGCCGAAGGATTCACACATGAGAGGAATCTTACCGCACACCGTGATGGTTTGGCTAGCAAATGCCTCAGCGAGCCAGATGATGTGGGGATGAGCGACACAGCAATGACATCTTTCCTTGGCTGTTGCTGGGATCTTCTTCAGACTTTAATGGAGGCAGACGTCAGCCGGGATGAAATGCAAGTGCCCGCCGTGGACGCGGAGGACGCCTGGCTGGCCGTGGAAGGACCGGTCTCCATCGTGGAGCTGGCGCTGGAGCAGAGGCACATCCACTACCCGCTGGTGGAGCACCACTCCGCCCTGTGTGCCCTCCTGTACGCCGTCATGAGGTTCTCCCTGAAGGCCGTCAAGCCACTCTCCCTCTTCGACAGCAAGGGGAAGAACGCATTTTTCAAAGACCTAACTTCAATTCAGTTATTACCTAGTGGGGAAATGGATGCAAATTTTATTTCTGTACGACAGCAGTTCTTATTGAAAGTCGTCAGTGCAGCTGTCCAGGCCCGACATGCAGTCACGAAGGACAAAGACTCCTCAGAAGAGGCACTGACCACTCTTTTTGGGAAAGACCAAGATTGGCCAGTGCTGGCCCTGGATCTGGCCCATCACCTTCAAGTTAGTGAAGATGTTGTTAGGAGGCATTATGTGGGGGAACTCTACAGCTATGGAGCTGACCACTTAGGAGAAGAGGCCATCCTCCAGGTTCAGGACAAAGAGGTCCTGGCCTCCCAGCTGCTGGTGCTGATAGGGCAGCGGCTGGCGCACGCGGTGCTGCGCACGCAGACGAGAGAGGGGCTGGAGCTACTCGCCAGGCTGCCCCCGACGCTGTGCACCTGGCTGAAGGCCATGAACCCCCAGGATCTTCAAAACACAGAAGTGCCAATTGCAACAACAGCTAAGCTAGTAAATAAAGTAATTGAGCTTTTACCAGAAAACCACGGGCAGTATAGTTTAGCCTTACACCTCACGGAAGCTGTGGAAGCCATAGCTATTCCTCCTTTATGA

Related Sequences

bmy_17004T0 Protein

Length: 999 aa      View alignments
>bmy_17004T0
MWKGYRDAQTGWIQIVEDLHERVPEKVHFSPFGSPQGPSRVAQFLVIYAPRRGILEVWSTQQGPRVGAFNVGKHCRLLYPGYKIMGLNNVTSQNWQPQTYQICLVDPVSGSVKTVNVPFHLALSDKKSERAKDMHLVKKLGALLKAKSPNLDLIETEIKELILDIKYPATKKQALESILASIRLPFSCLRNITQTLMDTLKNQELECVDEGLLQFCANKLKLLHLYESVSQLNSIDFHSDTPFSDNDLAVLLRLDEKELLKLQALLEKYKQENSRTAVRFSDDKDGVLPVKTFLEYLEYEKDVINIKKISEEDCVALGSFFFWKCLCGESSTEDMCHTLESAGLSPQLLLSLLLSVWLSKEKDILDNPQSVCCLHTMLYLLSKMKVAGEETWDSQSVSPWWQQMRTACIQSENNGAALLSAHVGHAVAAQLSNNLTEKKFSQTVSGTDSEALTDSWEALSLDTEYWKLLLKQLEDCLLLQTLLHSKVNAPTSKASSLQAEPLPKLSVKKLLEGGKGGIADSVAKWIFKQDVSPEVLKLANKERDAENSDEPKEGINRALSEVSEVEKDLGAIPDLLHLAYKQFPCSLELDVLHAHCCWEYVVQWNKDPEEALFFVRSIEHLEHILNAHVQNGIALMMWNTFLVKRFSAATYLMDKVRLEKHQRIGYAEGFTHERNLTAHRDGLASKCLSEPDDVGMSDTAMTSFLGCCWDLLQTLMEADVSRDEMQVPAVDAEDAWLAVEGPVSIVELALEQRHIHYPLVEHHSALCALLYAVMRFSLKAVKPLSLFDSKGKNAFFKDLTSIQLLPSGEMDANFISVRQQFLLKVVSAAVQARHAVTKDKDSSEEALTTLFGKDQDWPVLALDLAHHLQVSEDVVRRHYVGELYSYGADHLGEEAILQVQDKEVLASQLLVLIGQRLAHAVLRTQTREGLELLARLPPTLCTWLKAMNPQDLQNTEVPIATTAKLVNKVIELLPENHGQYSLALHLTEAVEAIAIPPL*