Part of scaffold_1415 (Scaffold)

For more information consult the page for scaffold_1415 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PDZD2 ENSTTRG00000006279 (Bottlenosed dolphin)

Gene Details

PDZ domain containing 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005954, Bottlenosed dolphin)

Protein Percentage 90.76%
cDNA percentage 93.41%
Ka/Ks Ratio 0.4547 (Ka = 0.0408, Ks = 0.0898)

PDZD2 ENSBTAG00000014455 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000043909, Cow)

Protein Percentage 81.71%
cDNA percentage 86.6%
Ka/Ks Ratio 0.35615 (Ka = 0.1043, Ks = 0.293)

PDZD2  (Minke Whale)

Gene Details

PDZ domain containing 2

External Links

Gene match (Identifier: BACU015044, Minke Whale)

Protein Percentage 97.31%
cDNA percentage 97.95%
Ka/Ks Ratio 0.38722 (Ka = 0.0146, Ks = 0.0376)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 6750 bp    Location:254407..306863   Strand:+
>bmy_17014
ATGCCTGGGACAGAGGACCCCCAAGATGCATGCGGCCCCGAGGAATCCAAGGGGCCCTTGGAAAGTCCGAAACAAGGAAGCAGTAAAATGAAGCTCAAGAGTCGTCTTTCAGGGGGTGTGCACCGTCTAGAGTCTGTTGAAGAATATAATGAGCTGATGCTGAGAAATGGGGACCCCCGGGCCAGGATGTTGGAGGTCTCCCGAGATGGCCGGAAGCACTCTCTCCCCCAGCTCCTGGACTCGACGGGCACAGCACAGGAATACCACATTGTGAAGAAGTCCACTCGCTCGCTAAGCGCTACTCAGGTGGAATCTCCTTGGAGACTCATTCGGCCATCGGTCATCTCTATCATTGGGCTGTACAAAGAAAAAGGCAAGGGCCTTGGCTTTAGCATTGCTGGAGGTCGAGACTGCATTCGAGGACAGATGGGGATTTTTGTCAAGACCATTTTCCCAAATGGATCAGCTGCAGAGGACGGAAGGCTTAAAGAAGGGGATGAAATCCTAGATGTAAATGGAATACCAATCAAGGGCTTGACATTTCAAGAAGCCATTCATACCTTTAAGCAAATCCGGAGTGGATTATTTGTCTTAACGGTACGCACCAAGTTACTGAGCCCGAGCCTCACACCCTGCTCCACACCCACGCACATGAGCAGATCCAGCTCCCCAAACTTCAACGCCAGTGGGGGAACCTCAGCGGTGGGCGCCGATGAAGGCAGTTCTTCGTCCCTGGGACGAAAGGCCCCCGGGCCAAAGGACAGAATTGTCATGGAAGTGACCCTCAACAAAGAGCCCAGAGTTGGATTAGGCATTGGTGCCTGCTGCCTGGCCCTAGAAAACAGCCCTCCGGGCATCTACATTCACAGCCTTGCCCCAGGATCAGTGGCCAAGATGGAGAGCAATCTGAGCCGCGGAGATCAAATCCTGGAAGTGAACTCAGTCAACGTCCGCCATGCTGCTTTGAGCAAAGTCCACGCCATCTTGAGCAAATGCCCGCCAGGACCCGTTCGCCTGGTCATCGGCCGGCACCCTAATCCAAAGGTTTCCGAGCAGGAAATGGATGAAGTGATAGCACGCAGCACTTATCAGGAGAGCAAAGAGGCCAATTCCTCTCCTGGCTTAGGTACCCCCTTGAAGAGTCCTTCTCTTGCAAAAAAGGACTCCCTGATCTCTGAATCTGAACTCTCCCAGTACTTTGCTCACGATGTCCCAGGCCCGCTGTCTGACTTCGTGGTGGCCGGCTCCGAGGATGAGGATCCCCCTGGAAGTGGCTGCAGCAGCTCCGCGGAGCTGCCTGGCGCCTCCCCTCACAAGGAACCAGGAAAAACCAGGGCCAACAGCCTTGTGTCTCTAGGAAGTCAGCGGGCCTCTGGGCTCTTCCACAAGCAGGTGACAATTGCCAGGCAAGCCAGTCTTCCCGGGAGCCCACAGGTCCTCCGAAACCCTCTCCTCCGCCAGAAGAGGGTGGGCTGCTACGATGACGACGCCAGCGATGAGGAAGAGTTTGATGGCGAAGGGGACTGCATTTCCCTCCCAGGGACCCTCTCAGGTCCCAGCAGGCCTCTGACAGAGGACGACTCTACATGCGTCTCAGCGGCCTCTTCCAAGGTCACGGGTATCAACCAAGAGGAACATCCCCAGAAAACCCTGGTCAGCAAGGCCTCCTCGGTGCCTCTCCTTGGCAGCTCGCTGGACTTACAGGAGAGTGTCCCAGGAGGCGTGGGGGACACCCTTTTACGTGCAGCCAACCCTCTGGTCCCTTCAGAGGCCCCCGAGGGTAGCCCTGGCTGCCTGGGGAGGAAGGAACCGTCAGGATCGAGGAGTTCACCCAAGTTGGAGTGCAAAGCCGGATCAGGCACCCAGAGTCTGGCGAACACGGACAGCCCCAGTTCCCTCCAGCAGAAGAATGACAACCTGGGGTCCAGGCACAAACCAGTGGCCAGGGTCAGCCCACACCACAAGAGGCCCGAGGCTGAGGCCAGGCCCAGGAGCTCAGAAACAGCAAACCTGACCGATGGAGCCAGTGACCCACGTGGTCCGGACTTGGAAGTCCAGGCCACTTCCATCAAAGTGGCTGTGACTGGTTATCAGCCAGGAGGAACTGTGGAGAAGGACTCTCTGGGCAAGCTGACCATTGGGGATGGACGAGTCCCCACCGACTGGGGGCCAGCTGGTACCCTGCCCCACCCAGATGCTGGCCACCCCACAGAGAAGCCGCCTGAAGCTGCACCCGAGCAGGGGAAAGAACCCGCGACAGGGCAGAAGGGGGCGGTGCACCCTGACCCCAGCGAGACCTCGGCGCACGCAGGGCCAGTGAGGCGACCCGAGGACCCCGGAGAGACAGAGTCACCCAGGGCGCCTGAGTCTGAGGACAGTGCATCCCCGGGGACGATGGCGACAGCTTATCCTGACCTCAGCGAGACCGGAGCGGCCCCAGAAGCCAGCTCRCCCCGCGCCACCAGGGAGGCCGCTGCCCACAGCGGAGCAGGACCCGCGGCCGAGGGGGCATCTCCGGCCACTGCCATGCTGTCACGAGACCTCACGACCCTGGAGAAGAGACGGGGGGTTCCGGGTCACCACAGCGAGGCTCTGCAAACCACGGGAACCCTCGTCCCTGGAAACTGCCGGGGGTCGGCTCTGCCCCCAGGAACAGACTCTGGGTCTGCAAGGGCGCCGCGGGCCAGCCCCTGCCTGCCGTCACCGAGTGACAAGGCCCCCGAGGGGTGTGGCGGTGCCTYGGGGCCCGGCTGCCCCGGGGGGAGCGGGAGCAGCCCCGTGACTGACATCGACAGGCTCCTGGAGGAGCTGGATGCTTCCGGAGCAAGGCTTCCGCCTCCCGGGAAAGGGGGCGGGCTGAGCCGGGAGCGCGCTGCCCCGGGGCCACAGCGGGCCGAGCCGGAGCCGGACTCGGGGAGCCAGGCCCCCAGCCCGAGGAGGCCCGCGGCTGCCGGTCCAGCCGCTTCCCCGCAGTGGGCCCACCAGCCTTCGGTTTTGGATTCCATCAACCCCGACAGACATTTTACTGTGAACAAAAGCCTTCTGAGCAGCTACTCTAGAAACCTCAGCAGCCAACACGAAGACAGTACATCGCTGTCGGGCCTGGGCGACAGCACGGAGCCGTCCCTCTCGTCCATGTACGGAGATGCTGAGGACTCATCTTCGGACCCCGAGTCGCTCACTGAAGCCCCACGAGCTCCCGCCAGGGACAGCTGGTCCCGTCCTTGTTTTTGTCCTCGTCCTCGTGGGGCTTCTCACAAGGGAGACACGACGGAGTCTGAGGAGGAGCAGGTTGAAATCTGTTCCGCGAAGGGCGCCCCCGATCCCCCCGCGGCCGCCGCTCTCGCTCCTGCCCAGGGCGCCGCCTGCCCTGCCTTCGCCAGAGCCCTGCCACCGAAGCGCGGAGCCCTAAGCCGGGCGAGGGGAGACGCCGCCGGGGACGCCGCCTCCTCCGCGCCGGGAGCCTTGGGCCCAGCAGCCCCGGGCCGTGCACGGCTGCCTCTTCTCTCGGACGCGAGCTCTCAGGAGCCGGAGACGCCCGAGGATGCACGGGCTGCCGAGGACCCCGGGGAAGCCGCCCAGCCTCCGCCCGTCCCCAGGCCTGTCCCCGGCCCCCCGGGCACCCTCAGCTCTCCTAACATGGTGAATGGTTTGGAGCATGACTGGCTGGATGACAAGACCCCGCCTGAAGAACAGGAAACAAATGTTCACGCCACTGGAAACCGGGGCGCCTTCAGGGCGTGCGTCCCCGAGAACAGAGACCTGGCTCTGGCAAACCTGCACATCTCCGAAGTTCAAGACCCGGACGACTTGCTGCCGAAGCCAAAACCCATCTCCAGGCGGCCCATCATGGCCTGGTTTAAAGAGATAAATAAAAGCAACCAAGGGACGCATCCGCAGAGCAAAAGTGAAACGGAACAACCCACGATGCCGGCCAGAAGGCCCGACCCCAAGGATCAGGCGCTGAGCACCAGCCACAAGAAGGGGGTGGCTGTACCGGATGGCCCCCCTCCCCGGCTGAGTCTTGAGAATAAAGACCTGCCTAAAAAAAGCTCCATGGAAACCCTTCTGAGTACGTGTCAGAAACCCAAAGCCGGCCCTAAGCTGAAGAGACTGAGCATCAAAAGCAAAAGCAAAGTCAGCTCCGAGGCCCCAGCCGCTCACCCGGGGAAGGCCGGGGGGACAGAGCACAGGAAAGCCCTTGTTTCACCCCAGGCCTCCCACAAAATGCTTTCTAAGGTGGCATCACGCCGGTTCCACACAGGTGACCAGGAGGAACCAGACAGAAGTGCCGCAGCCTCCCCCCAGTCCCCCCAGTGTGTGGAGGGCAAGCTGCCCCAGGGCACCCCAGGCTCCCTGAAGCCCTCGGCATCCGACACCAGCATCAGGATGTTCATTTCGCCCTTGACCTCCTCCAAGACCCTTCCTGAGCAAGGTGCGTGCAGTAGGCCCCACCCGGCTGTGCACTCAGAACCGGACCAAGGCTGCCCGGCTGCCCCCAGATCTCCAAAGTGTGGTCCAGAGAGCAAGGCTCCCCCTGCGTCCCCTGGGCTGGTGAGTCCCATGGCACCAAGGAGCGGCGTGTCCACAGCGGCCAGCAAGTGGGAGGTCCCCCCTACCGGGCAGGGCGAGCAGCCCCCGTCCAGCCAAATGGACTCAGCAGCAGAAGCCTTCCAGGCCGGAGGGACTGGCGACAAAAGAAGCAAAATAATCGCTGGTGAGCCCCTYGAAAGGACCAACCAGCTGAAAATCATTGAGATCTCTTCTGAAAGGACGCCGAAGAATGCGTATGGTGACAAGCCAGCTGAAAGTGACAGACAGGGAGGGTTCCTGGCCCAGAGCAACTGTCAGGAGAAGAGTGAATTCAGGCTCTGTCACCAGTCAGTGGAATCATCCCCAAATCATCCATCCTCACTCACGTCTCGGGCCTCCCAGGTGGAGCAGGAAGCGCAGCGATCTGTCAGCAGGGCGAAACAGACTTCCTCCTCCTCCTCCTCCCCGCAGCTGCTGGCTAAAAAGGCAGATCCCTGGCAGGGAAAGTCAGACCAGAGGGCAGACTCCTTGGGGATGCCCAGGAACGGCACGACAGTGGGCCCGGCGCTGGGTGACCATCCCTACTTCACGCCAAGGCCAGCAACCAGGACCTACTCCATGCCGGCCCAGTTCTCCAGCCATTTCGGCCGGGAGGGTCATGCCCTACACAGCCCAGGGCGCGCCCCTCGGGACAGCCAGATCCCTGCCACCAGTGGGGGCCTCCTCGAGGCCAAGGCGTCCAGAGGCAGTGTTCTCAGCCTGGTTAATGGACAGGGCGTGTATAGCGTAAAGCCCCTGCTGGAGACTTCGAGGAACCTTCCAACAACAGACGAAGGGGATGTCCTATCAGTGCAGGAAACAAGCTGCCTACTCACAGACAAAATCAAAGTCACCAGGAGATACTACTACTCTGAGCAGAACTGGCCCCATGAATCTACCTCATTTTTCTCTGTGAAGCAGAGGATCAAGTCTTTTGAGAACCTGGCCAATTCTGACCGGCCCACGGCCAAGTCCGGGGCCTCCCCCTTTCTGTCGGTAAGCTCCAAGCCTCCCATTGCGAGGCGGTCTTCAGGCAGCGTGGCGTCCGGGAACCTCGGCCACTCCAGTGACCCAGCAGCGAGGTCGCTGAGACGCAGCCTGAGTTCCTGCAGTGAAAGCCAAGGTGAAGCCAGCACCCTCATTCCCCCGATGACCAAGTCCCCGTCCAGCATGACTCTGACAGCCTCCCGGCAAAGCCCGGTGGAGGCTGGTAACAAGGGCGCTGACTCAGACCCGAAGCGATCACTTGGTCCTTCGGGAATCCCTACCCCCACGGTGACCCCAGCCTCTCCCGCCAAGAGAAACAAGTCCTCGGTGCGTCACACCCAGGCTTCACCTTTGTCCCGCTCGAAGCTCCAGGAGCTGAGAGCCCTGAGCATGCCTGACCTCGACAAGCTCTGCAGCGAGGACTTCTCGGCTGAGCCGACTGCCGTGCTCTTCAAAACCGAGCTGGAAATCGTCCCCCGGAGTTTGCATCAACTCCTGGTCTCAGCGGGGGATCAGCAAAGACTGCAGTCTGTTTTGTCATCAGCGGAGTCAAAATCTACTGTCCTAGCTCTCATTCAGGAAGCGAAAGCACAATCAGAGAATAAAGAAGATATTTACTTCATAGTCTTGAATAAAAAAGAAGGCTCAGGTCTGGGATTCAGTGTGGCAGGAGGGACAGATGTGGAGCCAAAATCAATTGTGATCCACAGGGTGTTTTCTCAGGGGGCAGCTTCTCAGGAAGGGACCGTGAGCCGAGGGGATTTTCTTCTGTCCGTCAACGGCGCCTCATTGGCTGGCTTAGCCCACGGGGAGGTCCTGAAGGTTCTGCACCAGGCACAGCTGCACAAAGATGTCCTCGTGGTCATCAAGAAAGGGAGTGATCGGCCCAGGCCCTCCCTCAGGCAGGAGCCTCCCATGGCCAATGGGAAGGGCTTGCTGTCCAGAAAGACCAGCCCCCTGGAGCCTGGAACAGGTAAGAACTGTAGTGTAGAAATCTGTTACATTTTGTGTGGTGCAGCTGAGCAAGCTGGAACAATAGAAGCTGGAGATGAAGTTCTTGCCATTAATGGGAAATCCCTGGTTGGGCTCATGCACTTCGATGCCTGGAATATTATGAAGTCTGTCCCAGAGGGACCTGTGCAGTTAGTAATTAGAAAGCACAGGAATTCTTCATGCAACAAGCACTGGTAG

Related Sequences

bmy_17014T0 Protein

Length: 2250 aa     
>bmy_17014T0
MPGTEDPQDACGPEESKGPLESPKQGSSKMKLKSRLSGGVHRLESVEEYNELMLRNGDPRARMLEVSRDGRKHSLPQLLDSTGTAQEYHIVKKSTRSLSATQVESPWRLIRPSVISIIGLYKEKGKGLGFSIAGGRDCIRGQMGIFVKTIFPNGSAAEDGRLKEGDEILDVNGIPIKGLTFQEAIHTFKQIRSGLFVLTVRTKLLSPSLTPCSTPTHMSRSSSPNFNASGGTSAVGADEGSSSSLGRKAPGPKDRIVMEVTLNKEPRVGLGIGACCLALENSPPGIYIHSLAPGSVAKMESNLSRGDQILEVNSVNVRHAALSKVHAILSKCPPGPVRLVIGRHPNPKVSEQEMDEVIARSTYQESKEANSSPGLGTPLKSPSLAKKDSLISESELSQYFAHDVPGPLSDFVVAGSEDEDPPGSGCSSSAELPGASPHKEPGKTRANSLVSLGSQRASGLFHKQVTIARQASLPGSPQVLRNPLLRQKRVGCYDDDASDEEEFDGEGDCISLPGTLSGPSRPLTEDDSTCVSAASSKVTGINQEEHPQKTLVSKASSVPLLGSSLDLQESVPGGVGDTLLRAANPLVPSEAPEGSPGCLGRKEPSGSRSSPKLECKAGSGTQSLANTDSPSSLQQKNDNLGSRHKPVARVSPHHKRPEAEARPRSSETANLTDGASDPRGPDLEVQATSIKVAVTGYQPGGTVEKDSLGKLTIGDGRVPTDWGPAGTLPHPDAGHPTEKPPEAAPEQGKEPATGQKGAVHPDPSETSAHAGPVRRPEDPGETESPRAPESEDSASPGTMATAYPDLSETGAAPEASSPRATREAAAHSGAGPAAEGASPATAMLSRDLTTLEKRRGVPGHHSEALQTTGTLVPGNCRGSALPPGTDSGSARAPRASPCLPSPSDKAPEGCGGAXGPGCPGGSGSSPVTDIDRLLEELDASGARLPPPGKGGGLSRERAAPGPQRAEPEPDSGSQAPSPRRPAAAGPAASPQWAHQPSVLDSINPDRHFTVNKSLLSSYSRNLSSQHEDSTSLSGLGDSTEPSLSSMYGDAEDSSSDPESLTEAPRAPARDSWSRPCFCPRPRGASHKGDTTESEEEQVEICSAKGAPDPPAAAALAPAQGAACPAFARALPPKRGALSRARGDAAGDAASSAPGALGPAAPGRARLPLLSDASSQEPETPEDARAAEDPGEAAQPPPVPRPVPGPPGTLSSPNMVNGLEHDWLDDKTPPEEQETNVHATGNRGAFRACVPENRDLALANLHISEVQDPDDLLPKPKPISRRPIMAWFKEINKSNQGTHPQSKSETEQPTMPARRPDPKDQALSTSHKKGVAVPDGPPPRLSLENKDLPKKSSMETLLSTCQKPKAGPKLKRLSIKSKSKVSSEAPAAHPGKAGGTEHRKALVSPQASHKMLSKVASRRFHTGDQEEPDRSAAASPQSPQCVEGKLPQGTPGSLKPSASDTSIRMFISPLTSSKTLPEQGACSRPHPAVHSEPDQGCPAAPRSPKCGPESKAPPASPGLVSPMAPRSGVSTAASKWEVPPTGQGEQPPSSQMDSAAEAFQAGGTGDKRSKIIAGEPLERTNQLKIIEISSERTPKNAYGDKPAESDRQGGFLAQSNCQEKSEFRLCHQSVESSPNHPSSLTSRASQVEQEAQRSVSRAKQTSSSSSSPQLLAKKADPWQGKSDQRADSLGMPRNGTTVGPALGDHPYFTPRPATRTYSMPAQFSSHFGREGHALHSPGRAPRDSQIPATSGGLLEAKASRGSVLSLVNGQGVYSVKPLLETSRNLPTTDEGDVLSVQETSCLLTDKIKVTRRYYYSEQNWPHESTSFFSVKQRIKSFENLANSDRPTAKSGASPFLSVSSKPPIARRSSGSVASGNLGHSSDPAARSLRRSLSSCSESQGEASTLIPPMTKSPSSMTLTASRQSPVEAGNKGADSDPKRSLGPSGIPTPTVTPASPAKRNKSSVRHTQASPLSRSKLQELRALSMPDLDKLCSEDFSAEPTAVLFKTELEIVPRSLHQLLVSAGDQQRLQSVLSSAESKSTVLALIQEAKAQSENKEDIYFIVLNKKEGSGLGFSVAGGTDVEPKSIVIHRVFSQGAASQEGTVSRGDFLLSVNGASLAGLAHGEVLKVLHQAQLHKDVLVVIKKGSDRPRPSLRQEPPMANGKGLLSRKTSPLEPGTGKNCSVEICYILCGAAEQAGTIEAGDEVLAINGKSLVGLMHFDAWNIMKSVPEGPVQLVIRKHRNSSCNKHW*