Part of scaffold_1421 (Scaffold)

For more information consult the page for scaffold_1421 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PTF1A ENSTTRG00000016843 (Bottlenosed dolphin)

Gene Details

pancreas specific transcription factor, 1a

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015968, Bottlenosed dolphin)

Protein Percentage 97.85%
cDNA percentage 97.44%
Ka/Ks Ratio 0.05636 (Ka = 0.0064, Ks = 0.1129)

PTF1A ENSBTAG00000047315 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000056491, Cow)

Protein Percentage 95.06%
cDNA percentage 93.93%
Ka/Ks Ratio 0.06076 (Ka = 0.0183, Ks = 0.3007)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 984 bp    Location:215589..214213   Strand:-
>bmy_17020
ATGGACGCGGTGCTGCTAGAGCACTTMCCCGGGGGCCTGGACGCCTTCCCGTCCCYTTACTTTGACGAGGAGGACTTCTTCACCGACCAGTCTTCTCGGGACCCTCTGGAGGACGGCGATGAGCTGCTGGCCGACGAGCAGGCCGAGGTGGAGTTCCTCAGCCACCAGCTGCACGAATACTGCTACCGCGACGGGGCGTGCCTGCTGCTGCAGCCCGCGCCCTCCGTGGCTCCGCACGCGCTCGCCCCGCCGCCCTCGGGGGGCCCCGGCGAGCCAGAGGACGGTGGCGGCGGCTACTGCTGCGAGGCGGGGGCGCCCCCCGGCGGCTTCCCCTACTCGCCCGGCTCGCCGCCCTCGTGCCTCGCCTACCCGTGCGCCGGGCCGGCCGTGCTGTCCCCCGGGGCGCGGCTGCGCGGCCTGAGCGGGGTGGCGGCGGCGGCGGCGCGGCGGCGGCGGCGGGTGCGCTCTGAGGCCGAGTTGCAGCAGCTGCGGCAGGCGGCCAACGTGCGCGAGCGGCGGCGCATGCAGTCCATCAACGACGCCTTCGAGGGGCTGCGCTCGCACATCCCCACGCTGCCCTACGAGAAGCGCCTCTCCAAGGTGGACACGCTGCGCCTGGCCATCGGCTACATCAACTTCCTCAGCGAACTCGTGCAGGCCGACCTGCCCTTGCGCGGCGGCGGCGCGGGCGGTGGCGGGGGACCGGGCGGCGGCGGGCGCCTGGGCGGGGACAGCCCGGGCAGCCAGGTCCAGAAGGTCATCATCTGCCATCGGGGCACCCGGTCCCCCTCCCCCAGCGACCCGGATTATGGCCTCCCTCCCCTCGCAGGACACTCTCTCTCTTGGACTGATGAAAAACAACTCAAAGAACAAAATATTATCCGAACAGCCAAAGTGTGGACCCCAGAGGATCCCAGAAAACTCAACAGCAAATCTTCCTTCAACAACATAGAAAACGAACCGCCCTTTGAGTTTGTGTCCTGA

Related Sequences

bmy_17020T0 Protein

Length: 328 aa      View alignments
>bmy_17020T0
MDAVLLEHXPGGLDAFPSXYFDEEDFFTDQSSRDPLEDGDELLADEQAEVEFLSHQLHEYCYRDGACLLLQPAPSVAPHALAPPPSGGPGEPEDGGGGYCCEAGAPPGGFPYSPGSPPSCLAYPCAGPAVLSPGARLRGLSGVAAAAARRRRRVRSEAELQQLRQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELVQADLPLRGGGAGGGGGPGGGGRLGGDSPGSQVQKVIICHRGTRSPSPSDPDYGLPPLAGHSLSWTDEKQLKEQNIIRTAKVWTPEDPRKLNSKSSFNNIENEPPFEFVS*