Part of scaffold_1439 (Scaffold)

For more information consult the page for scaffold_1439 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SMCR7 ENSTTRG00000008162 (Bottlenosed dolphin)

Gene Details

Smith-Magenis syndrome chromosome region, candidate 7

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007725, Bottlenosed dolphin)

Protein Percentage 87.05%
cDNA percentage 90.5%
Ka/Ks Ratio 0.31612 (Ka = 0.0752, Ks = 0.2378)

SMCR7 ENSBTAG00000017081 (Cow)

Gene Details

Smith-Magenis syndrome chromosome region, candidate 7

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022714, Cow)

Protein Percentage 79.9%
cDNA percentage 82.9%
Ka/Ks Ratio 0.15609 (Ka = 0.1186, Ks = 0.7596)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1167 bp    Location:99027..103511   Strand:+
>bmy_17026
ATGAGAAACTGTCATCAGGCGCTCGCTGTGCGTGAGGACCTGAGCTTGGTGCTTTCTCAGGTGGTCACGTTACATCCCTCTGACACGGGCCCCCCGCCCCTTCACTCTACAGAGGGGCCCGCAGACGCAGATCCCCCGACGTCGCCTCAGCTCTGCTCCCCAGCGCCGTCGATGTGCCTGACGTTCCAGGAGAAGCTGCTGGCGTTCGAGCGGGACCACGTGACCATGCCAGTGGCCCACGTGGCTCTGGCCAAGCAGCTGGCCGGTGACATTGCCCTGGAGCTGCAGGCCTACCTGCGGAACAAGTTCCCAGAACTGCCCTTCGGGGCGCTCGTGCCTGGCGGGCCGCTCTATGACGGGCTGCAGGCGGGGGCCGCCGACCCCGTGCGTCTCCTGGTGCCCCTGGCGCTGGAGCCTGGCCTGTGGAGCCTGGTGCCTGGTGTGGACACCGTAGCCCGGGACCCTCGCTGCTGGGCCGTGCGCAGGACTCAGCTGGAGTTCCACCCCCGCGGGAGCAGCCCCTGGGACCGCTTCCTGGTGGGCGGCTACCTCTCCTCCCGGGTCCTGCTGGGGCTGCTCCGCCAGGCCCTGACCGCCTCCGTCAACTGGCCGGCCATCGGCATCCTCCTCGGGTGCCTGGTCCGGCCGCGCGTGGCCTCGGAGGAACTGCTGCTCGAGGTGCAGCACGAGTGTCTGGACTTCCCCGTGGCCGTGCTCCTGGCCATCGCTGGCGCCCAGGCCGGAGGCCTCCTGCTGGCCTGGCCCCTGGAGGGGCTGGCTGGCAACTTCTGGCTGCAGGACTGGTACCCGGCGGAGGCGGCCCGGCTGCGGGCCCTGGATGAGCGCGACGCTGGGACCCGCCGGCGGCTGCTGCTGTTGCTGTGCGGCGTCTGCCGTGGCCACCCGGCGCTGGGGCGGCTGGGCCGCGGCCCCCTGACCCAGGTGGTTCTGCACCTGGGCGAGCAGGAAGCGGACTGGGGTGAGGAGGCCCTGGGGGAGCGCTTCCTGCAGGCCCTGGAGTTGCTCATCGGCAGCCTGGAGCGGGCCAGCCTGCCCTGCCACTTCAGCCGTGGCGTGAATCTCCTGGACGGCCTGCGGGAAGAGGACATCGACGACATGGGCTGTGCGCTGTACTGGGGCCTGCGGGCCCCTGAGGGGCTGCTCTAG

Related Sequences

bmy_17026T0 Protein

Length: 389 aa      View alignments
>bmy_17026T0
MRNCHQALAVREDLSLVLSQVVTLHPSDTGPPPLHSTEGPADADPPTSPQLCSPAPSMCLTFQEKLLAFERDHVTMPVAHVALAKQLAGDIALELQAYLRNKFPELPFGALVPGGPLYDGLQAGAADPVRLLVPLALEPGLWSLVPGVDTVARDPRCWAVRRTQLEFHPRGSSPWDRFLVGGYLSSRVLLGLLRQALTASVNWPAIGILLGCLVRPRVASEELLLEVQHECLDFPVAVLLAIAGAQAGGLLLAWPLEGLAGNFWLQDWYPAEAARLRALDERDAGTRRRLLLLLCGVCRGHPALGRLGRGPLTQVVLHLGEQEADWGEEALGERFLQALELLIGSLERASLPCHFSRGVNLLDGLREEDIDDMGCALYWGLRAPEGLL*