Sequence detailsbmy_17026 (Coding sequence)

Part of scaffold_1439 (SequenceType object (1))

For more information consult the page for scaffold_1439 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SMCR7ENSTTRG00000008162 (Bottlenosed dolphin)

Gene Details

Smith-Magenis syndrome chromosome region, candidate 7

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007725, Bottlenosed dolphin)

Protein Percentage 87.05%
cDNA percentage 90.5%
Ka/Ks Ratio 0.31612 (Ka = 0.0752, Ks = 0.2378)

SMCR7ENSBTAG00000017081 (Cow)

Gene Details

Smith-Magenis syndrome chromosome region, candidate 7

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000022714, Cow)

Protein Percentage 79.9%
cDNA percentage 82.9%
Ka/Ks Ratio 0.15609 (Ka = 0.1186, Ks = 0.7596)

Additional orthologs identified in other species via the OPTIC pipeline.

MIEF2 (Human)   Smcr7 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1167 bp    Location:99027..103511   Strand:+
Raw sequence 
>bmy_17026
ATGAGAAACTGTCATCAGGCGCTCGCTGTGCGTGAGGACCTGAGCTTGGTGCTTTCTCAGGTGGTCACGTTACATCCCTCTGACACGGGCCCCCCGCCCCTTCACTCTACAGAGGGGCCCGCAGACGCAGATCCCCCGACGTCGCCTCAGCTCTGCTCCCCAGCGCCGTCGATGTGCCTGACGTTCCAGGAGAAGCTGCTGGCGTTCGAGCGGGACCACGTGACCATGCCAGTGGCCCACGTGGCTCTGGCCAAGCAGCTGGCCGGTGACATTGCCCTGGAGCTGCAGGCCTACCTGCGGAACAAGTTCCCAGAACTGCCCTTCGGGGCGCTCGTGCCTGGCGGGCCGCTCTATGACGGGCTGCAGGCGGGGGCCGCCGACCCCGTGCGTCTCCTGGTGCCCCTGGCGCTGGAGCCTGGCCTGTGGAGCCTGGTGCCTGGTGTGGACACCGTAGCCCGGGACCCTCGCTGCTGGGCCGTGCGCAGGACTCAGCTGGAGTTCCACCCCCGCGGGAGCAGCCCCTGGGACCGCTTCCTGGTGGGCGGCTACCTCTCCTCCCGGGTCCTGCTGGGGCTGCTCCGCCAGGCCCTGACCGCCTCCGTCAACTGGCCGGCCATCGGCATCCTCCTCGGGTGCCTGGTCCGGCCGCGCGTGGCCTCGGAGGAACTGCTGCTCGAGGTGCAGCACGAGTGTCTGGACTTCCCCGTGGCCGTGCTCCTGGCCATCGCTGGCGCCCAGGCCGGAGGCCTCCTGCTGGCCTGGCCCCTGGAGGGGCTGGCTGGCAACTTCTGGCTGCAGGACTGGTACCCGGCGGAGGCGGCCCGGCTGCGGGCCCTGGATGAGCGCGACGCTGGGACCCGCCGGCGGCTGCTGCTGTTGCTGTGCGGCGTCTGCCGTGGCCACCCGGCGCTGGGGCGGCTGGGCCGCGGCCCCCTGACCCAGGTGGTTCTGCACCTGGGCGAGCAGGAAGCGGACTGGGGTGAGGAGGCCCTGGGGGAGCGCTTCCTGCAGGCCCTGGAGTTGCTCATCGGCAGCCTGGAGCGGGCCAGCCTGCCCTGCCACTTCAGCCGTGGCGTGAATCTCCTGGACGGCCTGCGGGAAGAGGACATCGACGACATGGGCTGTGCGCTGTACTGGGGCCTGCGGGCCCCTGAGGGGCTGCTCTAG

Related Sequences

bmy_17026T0 SequenceType object (3)

Length: 389 aa      View alignments
>bmy_17026T0
MRNCHQALAVREDLSLVLSQVVTLHPSDTGPPPLHSTEGPADADPPTSPQLCSPAPSMCLTFQEKLLAFERDHVTMPVAHVALAKQLAGDIALELQAYLRNKFPELPFGALVPGGPLYDGLQAGAADPVRLLVPLALEPGLWSLVPGVDTVARDPRCWAVRRTQLEFHPRGSSPWDRFLVGGYLSSRVLLGLLRQALTASVNWPAIGILLGCLVRPRVASEELLLEVQHECLDFPVAVLLAIAGAQAGGLLLAWPLEGLAGNFWLQDWYPAEAARLRALDERDAGTRRRLLLLLCGVCRGHPALGRLGRGPLTQVVLHLGEQEADWGEEALGERFLQALELLIGSLERASLPCHFSRGVNLLDGLREEDIDDMGCALYWGLRAPEGLL*