Sequence details bmy_17027 (Coding sequence)

Part of scaffold_1439 (Scaffold)

For more information consult the page for scaffold_1439 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TOP3A ENSTTRG00000008163 (Bottlenosed dolphin)

Gene Details

topoisomerase (DNA) III alpha

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007726, Bottlenosed dolphin)

Protein Percentage 95.11%
cDNA percentage 95.01%
Ka/Ks Ratio 0.19258 (Ka = 0.0298, Ks = 0.1547)

BT.103042 ENSBTAG00000017087 (Cow)

Gene Details

DNA topoisomerase 3-alpha

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022721, Cow)

Protein Percentage 88.32%
cDNA percentage 88.12%
Ka/Ks Ratio 0.12672 (Ka = 0.0619, Ks = 0.4886)

Additional orthologs identified in other species via the OPTIC pipeline.

TOP3A (Human)   Top3a (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3147 bp    Location:133574..107359   Strand:-
Raw sequence 
>bmy_17027
ATGATCTTCCCAGCCGCCCGCTGCGCGCTCCGCTGGCTGCCGCGGCCTGGGAGCCGGGCGCTGACCCTCGCCGACATGGAGGTGGCTCTGCGAGGCGTGCGGAAGATCCTCTGCGTGGCCGAGAAGAACGACGCGGCCAAGGGCATCGCCGACCTGCTGTCCGGCGGCCGCATGCGGCGGAGAGAAGGACTTTCCAGATTCAACAAGATCTATGAGTTTGATTATCGTCTGCGTGGCCAGAATGTCACCATGATAATGACTTCAGTCTCAGGACACTTGCTGGCTCATGATTTCCAGATGCAGTTTCGCAAATGGCAGAGCTGCAATCCTCTTGTCCTCTTTGAAGCAGAAATTGAAAAGTACTGCCCAGAGAATTATTTAGACATCAAGAAAACTCTGGAGCGAGAGGCTCGGCAGTGCCAGGTCCTGGTGATCTGGACCGACTGCGACAGAGAAGGTGAAAACATCGGGTTTGAGATCATCCACGTGTGCAAGGCTGTGAAGCCCAGCCTGCAGGTGCTGCGAGCCCGTTTCTCCGAGATCACTGCCCGTGCTGTCCAGGCGGCCTGTGAAAACCTGATGGAGCCTGACCGCAGAGTGAGCGACGCCGTCGACGTGAGGCAGGAGCTGGACCTGCGGATCGGGGCTGCCTTCACCAGGTTCCAGACCCTGCGGCTGCAGAAGATCTTTCCCGAGGTGTTGGCGGAGCAGCTGATCAGTTATGGCAGCTGCCAGTTCCCCACCCTGGGGTTCGTGGTGGAGAGGTTCAAAGCCATTCAGGCATTCGTGCCAGAAACCTTCCACAAAATCAGAGTGACTCATGACCACAGGGATGGCGCAGTGGAGTTCAGCTGGAAAAGGCATCGGCTCTTCAACCACACGGCTTGTCTTGTCCTCTATCAGCTGTGCATGGAGGATGTGGTGCAGGGAAACATGGCAGGATCCCAGGGCGACCGTGGTGGAGGTCAGGTCCAAGGCAAAAAGCAAGTGGAGGCCTCAAGCTTTGGACACTGTGCCGTGCGCAAGCAGCTGGAGGGGCGCCGGGAGGTTCTGAAGAGGAGGCGTGTGGCGTGCTGGGGCCTGAGACTCATGCACTGTGCCTGCCCGCACATCTTACAGGAACTTGAGAAGCTGGCTTCTCGGAAGCTGAGGATAAATGCTAAAGAAACCATGAGGATTGCTGAAAAGCTCTACACTCAAGGGTACATCAGCTATCCCCGAACTGAAACAAACATTTTCCCCAAAGACTTAGACCTGACAGCGCTGGTGGAGGAGCAGACCCCGGACCCGCGCTGGGGGCCCTTCGCCCAGAGCATTCTAGAGCGGGGCGGCCCCACTCCACGCAACGGGAACAAGTCTGACCAAGCTCACCCCCCCATCCACCCCACCAAGTACACTGACAGCCTGCAGGGGGACGAGCAGCGACTGTACGAGCTCATCGTCCGCCACTTCCTGGCCTGCTGCTCCCAGGACGCCCAGGGCCAGGAGACCACCGTGGAGATTGACATCGCGCAGGAGCGCTTCGTGGCCCACGGCCTCATGATCCTGGCCCGAAACTATCTGGACGTGTACCCCTACGATCGCTGGAGCGACAAGACCCTCCCTGTGTACAGTCAAGGCTCCTGCTTTCAGCCCAGCACTGTGGAGATGGTGGACGGGGAGACCAGTCCGCCCCAGCTGCTCACTGAGGCCGACCTTATTGCCCTCATGGAGAAGCACGGCATCGGTACCGACGCGACGCACGCGGAGCATATCGAGACCATCAAGGCCCGGATGTACGTCGGGCTCACGCCAGACAAGCGCTTTCTCCCCGGGCACCTGGGCATGGGGCTCGTGGAAGGCTATGACTCCATGGGCTACGAGATGTCCAAGCCTGACCTGCGGGCCGAGCTGGAGGCCGACCTGAAGCTCATCTGCGAGGGGAAGAAGGATAAGCTCGTGGTCCTGCAGCAGCAGGTGCAGAAGTACAAGCAGGTCTTCATCGAAGCCATGGCCAAAGCCCAGAGGTTGGACGAGGCCTTGTCCCAGTACTTTGGGGCAGGGGCGGAGCTGGCCCAGCAAGAAGCCATCTTCCCAGCTGTGCCGGAGCCCGTCAGGAAGTGCCCGCAGTGCGGCAAGGACATGGTCCTCAAGACCAGGAAGAGCGGCGGGTTCTACCTCAGCTGCACGGGGTTCCCGCAGTGTCGCTCGGCCGTGTGGTTCCCGGACAGTGTGCTGGAGGCCAGCAGGGACGGGAGCGTGTGTCCGGTGTGCCAGCCACACCCCGTTTACAGGTTGAAGTTCAAGTTTAAGCGAGGCAGCCTTCCCCCAACCATGCCACTGGAATTTGTTGGCTGCGTTGGCGGATGTGACGAGACCCTGCGGGAGATCTTGGACCTCAGGTTTTCACAGGGGCCCCCCCGAGCTGGCCAGCCAGTCAGCCAGCCCTCCGGCCACCTGCAGGCAAGCCAGGCCCTGAACAGAATGGGCAGCAGCCAGCACGGCCACCCCCAGCCTCCTGCCACCAGGCCCTCGAAGGCTCTGGCCAGGACCCTGCCCCTGCCCGCCGCCGAGGGCGAAAGCAACTCCGTGACCTGCAACTGTGGCCGGGAGGCCTTGCTGCTCACCGTCCGGAAGGAGGGGCCCAACCAGGGCCGCCAGTTCTACAGGTGCAGCAGCGGCGGCTGTAGCTTCTTCCTGTGGGCCGACAGCGGCCACCCAGAAGCAGGGGGGCGTCCCTCCGAGGTGCCCAGACCCCCGGGCGGCTCACTGGGACGCCCGCCGGGCTCAGGGAAGCCCCTGGGCGGGCCCAGAAGCCCCGGCGATGGTGGCGGTGGCGGTGGCGCGTGCTGCCTGTGCAGCCAGCCGGCTGTCACGCGCACTGTGCAGAAGGACGGGCCCAACAAGGGGCGCCAGTTCCACACGTGCGCCAAGCCCCGGGAGCAGCAGTGCGGCTTCTTCCAGTGGGTGGACGAGAACGTGGCCCCAGGGACCTTTGGAGGCCCCCCCTGGGCAGGAGCCAGAGGAGGAAGCCAGGGGCCGGAGGCCAGAAGCAAAAGGGCCCGGGCTGGTTCCTCGGACGCAGGGTCCGCGGCCAAGAAACCCCGGAAGTGCAGCCTTTGCCACCAGCCTGGACACACCCGTCCCTTCTGTCCTCAGAACAGATGA

Related Sequences

bmy_17027T0 Protein

Length: 1049 aa      View alignments
>bmy_17027T0
MIFPAARCALRWLPRPGSRALTLADMEVALRGVRKILCVAEKNDAAKGIADLLSGGRMRRREGLSRFNKIYEFDYRLRGQNVTMIMTSVSGHLLAHDFQMQFRKWQSCNPLVLFEAEIEKYCPENYLDIKKTLEREARQCQVLVIWTDCDREGENIGFEIIHVCKAVKPSLQVLRARFSEITARAVQAACENLMEPDRRVSDAVDVRQELDLRIGAAFTRFQTLRLQKIFPEVLAEQLISYGSCQFPTLGFVVERFKAIQAFVPETFHKIRVTHDHRDGAVEFSWKRHRLFNHTACLVLYQLCMEDVVQGNMAGSQGDRGGGQVQGKKQVEASSFGHCAVRKQLEGRREVLKRRRVACWGLRLMHCACPHILQELEKLASRKLRINAKETMRIAEKLYTQGYISYPRTETNIFPKDLDLTALVEEQTPDPRWGPFAQSILERGGPTPRNGNKSDQAHPPIHPTKYTDSLQGDEQRLYELIVRHFLACCSQDAQGQETTVEIDIAQERFVAHGLMILARNYLDVYPYDRWSDKTLPVYSQGSCFQPSTVEMVDGETSPPQLLTEADLIALMEKHGIGTDATHAEHIETIKARMYVGLTPDKRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKKDKLVVLQQQVQKYKQVFIEAMAKAQRLDEALSQYFGAGAELAQQEAIFPAVPEPVRKCPQCGKDMVLKTRKSGGFYLSCTGFPQCRSAVWFPDSVLEASRDGSVCPVCQPHPVYRLKFKFKRGSLPPTMPLEFVGCVGGCDETLREILDLRFSQGPPRAGQPVSQPSGHLQASQALNRMGSSQHGHPQPPATRPSKALARTLPLPAAEGESNSVTCNCGREALLLTVRKEGPNQGRQFYRCSSGGCSFFLWADSGHPEAGGRPSEVPRPPGGSLGRPPGSGKPLGGPRSPGDGGGGGGACCLCSQPAVTRTVQKDGPNKGRQFHTCAKPREQQCGFFQWVDENVAPGTFGGPPWAGARGGSQGPEARSKRARAGSSDAGSAAKKPRKCSLCHQPGHTRPFCPQNR*