Part of scaffold_1447 (Scaffold)

For more information consult the page for scaffold_1447 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PSMC2 ENSTTRG00000010701 (Bottlenosed dolphin)

Gene Details

proteasome (prosome, macropain) 26S subunit, ATPase, 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010147, Bottlenosed dolphin)

Protein Percentage 85.2%
cDNA percentage 86.64%
Ka/Ks Ratio 0.40396 (Ka = 0.1143, Ks = 0.283)

PSMC2 ENSBTAG00000046712 (Cow)

Gene Details

26S protease regulatory subunit 7

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000056372, Cow)

Protein Percentage 85.2%
cDNA percentage 85.92%
Ka/Ks Ratio 0.32723 (Ka = 0.1125, Ks = 0.3439)

PSMC2  (Minke Whale)

Gene Details

proteasome (prosome, macropain) 26S subunit, ATPase, 2

External Links

Gene match (Identifier: BACU006881, Minke Whale)

Protein Percentage 85.2%
cDNA percentage 87.85%
Ka/Ks Ratio 0.55597 (Ka = 0.1153, Ks = 0.2075)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 834 bp    Location:350090..329997   Strand:-
>bmy_17054
ATGTCCAGGAACCGGCGCATGGAGACGACCAATAACTACTTCCGGGATGAATCTTTCGTGGGTCAGAGCACTTACTCTAGGCAAATCAAACAGGTTGAAGATGACATTCAACAACTTCTCAAGAAAATTAATGAGCTCACGGCACTCTGGGATTTGGCTGCCGATAAGCAAACACTCCAGAGTGAACAGCCTTTGCAGGTTGCGAGTGTGGACAGAAATAAGTATCAGATTCACATTCCACTGCCTCCTAAGATTGACCCAACAGTTACCATGATGCAGGTGGAGGAAAAACCTGATGTTACATATAGTGATGTGGGTGGCTGTAAGGAACAGATTGAGAAACTTCGAGAAGTAGTTGAAACCCCATTACTTCATCCAGAGAGGTTTGTTAACCTTGGCATTGAGCCTCCTAAGGGTGTGCTGCTCTTTGGTCCACCGGGTACAGGCAAGACACTCTGTGCTCGGGCAGTTGCTAATAGGACTGACGCTTGCTTCATTCGAGTTATTGGATCTGAACTTGTACAGAAGTACGTCGGGGCTCGTTTTGACGATGGTGCTGGGGGTGACAATGAAGTGCAGAGGACCATGTTGGAGCTGATCAATCAGCTGGATGGGTTTGATCCTCGAGGCAACATTAAAGTTCTGATGGCCACAAACAGACCTGACACTCTGGACCCAGCGCTGATGAGGCCTGGGAGACTGGACAGGAAGATTGAGTTTAGCTTACCTGATCTAGAGGTGGGAACATCATTTCACTGTAGAAAAGGGATTCTTGAAACTTCTTCTTCCTGTGCTGTTTTCCATTTTAATATTTGTCAATTCCCCTATTTTTAG

Related Sequences

bmy_17054T0 Protein

Length: 278 aa      View alignments
>bmy_17054T0
MSRNRRMETTNNYFRDESFVGQSTYSRQIKQVEDDIQQLLKKINELTALWDLAADKQTLQSEQPLQVASVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEVGTSFHCRKGILETSSSCAVFHFNICQFPYF*