Part of scaffold_1447 (Scaffold)

For more information consult the page for scaffold_1447 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PMPCB ENSTTRG00000010699 (Bottlenosed dolphin)

Gene Details

peptidase (mitochondrial processing) beta

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010145, Bottlenosed dolphin)

Protein Percentage 98.9%
cDNA percentage 98.76%
Ka/Ks Ratio 0.13406 (Ka = 0.0048, Ks = 0.0362)

PMPCB ENSBTAG00000006876 (Cow)

Gene Details

mitochondrial-processing peptidase subunit beta precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004922, Cow)

Protein Percentage 96.53%
cDNA percentage 96.26%
Ka/Ks Ratio 0.142 (Ka = 0.0158, Ks = 0.1114)

PMPCB  (Minke Whale)

Gene Details

peptidase (mitochondrial processing) beta

External Links

Gene match (Identifier: BACU019747, Minke Whale)

Protein Percentage 98.69%
cDNA percentage 98.83%
Ka/Ks Ratio 0.16426 (Ka = 0.005, Ks = 0.0303)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1620 bp    Location:392942..373104   Strand:-
>bmy_17056
ATGATGGCGGCTGCGGCGGTGGCCCGAGCGGTGGTGTTGCCCGCGGTGCGGCGGAGGCTCTGCGGTTTCTCCGAGAGGCTCCTGGCCGGAGGTGCTGCCGGGCGGTCACTATATTTTGGAGGAAACAGATTGAGAAGTACCCAGGCTGCTACACAAGTTGTTCTGAATGTCCCTGAAACGCGCGTAACCTGTTTGGAGAACGGACTCAGGGTGGCCTCTGAAGACTCTGGGCTCTCAACATGCACAGTTGGGCTCTGGATTGATGCTGGAAGTCGATATGAAAATGAGAAGAATAATGGAACAGCTCACTTTCTGGAGCATATGGCTTTCAAGGCAAGTTATAAGACTTTTTTTTTTTTAATGAATTTTTCTTTAAGAGGCAGTAAACACAAAATCTCATTCTCAGAGCTGAAACAAGGATTTTCTCTTGGGATGTGGGGGTCATCTGAAAGTATGCCACTATTTCTGAAGCCTGATGGCACCAAAAAGAGATCCCAGTTAGATCTGGAACTTGAGATTGAAAACATGGGTGCTCATCTCAATGCCTATACCTCCAGAGAGCAGACTGTATATTATGCCAAAGCATTCTCTAAAGATTTGCCAAGAGCTGTAGAAATTCTTGCTGATATAATACAAAACAGCACATTGGGAGAARCAGAGATTGAACGTGAACGTGGAGTAATCCTTAGAGAGATGCAGGAAGTTGAAACCAATTTACAAGAAGTTGTTTTTGATTATCTTCATGCCACAGCTTATCAAAATACTGCACTTGGACGGACAATTTTGGGACCAACTGAAAATATCAAATCTATAAATCGTAAGGACTTAGTGGATTATATAACCACACATTATAAGGGGCCAAGAATAGTACTTGCTGCTGCTGGAGGAGTTTCCCATGATGAACTGCTTGAGTTAGCAAAGTTTCATTTTGGTGACTCTTTGTCCACACACAAAGGAGAAATACCAGCTCTGCCTCCCTGCAAATTCACAGGAAGTGAGATTCGAGTGAGGGATGACAAGATGCCTTTGGCACATCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATACAATCTGTCTCATGGTTGCAAACACACTGATTGGCAACTGGGATCGCTCTTTTGGAGGAGGAATGAATTTATCTAGCAAGCTGGCCCAGCTCACCTGTCATGGCAACCTCTGCCATAGCTTCCAGTCTTTCAACACTTCCTACACAGATACAGGATTATGGGGAATCTATATGGTTTGTGAACCAGCCACTGTTGCAGACATGCTACATGTTGTTCAAAAAGAATGGATGCGACTCTGTACAAGTGTCACTGAAAGTGAAGTTGCACGAGCCAAGAATCTTCTGAAAACAAACATGTTGCTGCAACTTGATGGTTCCACTCCCATCTGTGAAGATATTGGTAGGCAAATGTTATGCTATAATCGAAGAATTCCCATCCCTGAGCTTGAAGCAAGAATTGATGCTGTAAATGCTGAGATAATTCGAGAAGTGTGTACCAAATATATTTATGATAAGAGTCCAGCTGTTGCTGCTGTTGGTCCCATTGAGCAGCTACCAGATTTTAGCCAGATTTGCAGTAACATGTGCTGGCTTCATGATTAA

Related Sequences

bmy_17056T0 Protein

Length: 540 aa      View alignments
>bmy_17056T0
MMAAAAVARAVVLPAVRRRLCGFSERLLAGGAAGRSLYFGGNRLRSTQAATQVVLNVPETRVTCLENGLRVASEDSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKASYKTFFFLMNFSLRGSKHKISFSELKQGFSLGMWGSSESMPLFLKPDGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEXEIERERGVILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSINRKDLVDYITTHYKGPRIVLAAAGGVSHDELLELAKFHFGDSLSTHKGEIPALPPCKFTGSEIRVRDDKMPLAHLAIAVEAVGWAHPDTICLMVANTLIGNWDRSFGGGMNLSSKLAQLTCHGNLCHSFQSFNTSYTDTGLWGIYMVCEPATVADMLHVVQKEWMRLCTSVTESEVARAKNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAEIIREVCTKYIYDKSPAVAAVGPIEQLPDFSQICSNMCWLHD*