Part of scaffold_1437 (Scaffold)

For more information consult the page for scaffold_1437 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

C1QTNF1 ENSTTRG00000003671 (Bottlenosed dolphin)

Gene Details

C1q and tumor necrosis factor related protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003442, Bottlenosed dolphin)

Protein Percentage 97.83%
cDNA percentage 97.71%
Ka/Ks Ratio 0.08899 (Ka = 0.0089, Ks = 0.1)

C1QTNF1 ENSBTAG00000006276 (Cow)

Gene Details

complement C1q tumor necrosis factor-related protein 1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008228, Cow)

Protein Percentage 94.2%
cDNA percentage 92.15%
Ka/Ks Ratio 0.05481 (Ka = 0.0259, Ks = 0.4725)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 831 bp    Location:231960..226256   Strand:-
>bmy_17062
ATGGGCCCCCGTGGGCTGGGACTCGCGCTGGCGTGCTGCCTGCTGCTGGCCTTCGCCTGTGGCCCGGTGCTGGGCCGCGTGCCCCGTGGGCAGCAGGAGCAGGAGGGGACCAGGGAGCCACCGCTGGACCACGCTGAGAGGGATGAAGAAAAACATGAAAAATACAACTCCAGGCAGGAAGAGGAGCCCCCCGCATCCCGGTGCTTTCGCTGCTGTGACCCTGGTACTCCCATGTACCAGGCCATCCCGGTGCCCCAGATCAACATCACCATTCTGAAAGGTGAGAAGGGCGACCGAGGAGATCGGGGCCTGCAAGGCAAATATGGCAAAACAGGCTCCGTGGGCGCCAGGGGCCACACGGGACCCAAAGGGCAGAAAGGGTCCATGGGGGCCCCCGGGGACCGGTGCAAGAACCACTACGCTGCCTTTTCGGTGGGCCGGAAGAAGCCCCTGCACAGCAACGACTACTACCAGACAGTGATTTTCGACACAGAGTTCGTGAACCTCTACGGCCACTTCAACATGTTCACGGGAAAATTCTACTGCTATGTCCCCGGCATCTACTTCTTCAGCCTCAATGTACACACCTGGAACCAGAAGGAGACATACCTGCACATCATGAAGAACGGGGAGGAGGTGGTGATCCTGTACGCCCAGGTGAGCGACCGCAGCATCATGCAGAGCCAGAGCCTGATGCTGGAGCTGCAGGACCAAGACGAGGTGTGGGTGCGCCTCTTCAAGGGCGAACGCGAAAACGCCATCTTCAGCGATGAGTTTGACACCTACATCACCTTCAGTGGCTACCTGGTCAAGCCCGCCACTGAGCCCTAG

Related Sequences

bmy_17062T0 Protein

Length: 277 aa      View alignments
>bmy_17062T0
MGPRGLGLALACCLLLAFACGPVLGRVPRGQQEQEGTREPPLDHAERDEEKHEKYNSRQEEEPPASRCFRCCDPGTPMYQAIPVPQINITILKGEKGDRGDRGLQGKYGKTGSVGARGHTGPKGQKGSMGAPGDRCKNHYAAFSVGRKKPLHSNDYYQTVIFDTEFVNLYGHFNMFTGKFYCYVPGIYFFSLNVHTWNQKETYLHIMKNGEEVVILYAQVSDRSIMQSQSLMLELQDQDEVWVRLFKGERENAIFSDEFDTYITFSGYLVKPATEP*