Part of scaffold_1437 (SequenceType object (1))

For more information consult the page for scaffold_1437 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

C1QTNF1ENSTTRG00000003671 (Bottlenosed dolphin)

Gene Details

C1q and tumor necrosis factor related protein 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003442, Bottlenosed dolphin)

Protein Percentage 97.83%
cDNA percentage 97.71%
Ka/Ks Ratio 0.08899 (Ka = 0.0089, Ks = 0.1)

C1QTNF1ENSBTAG00000006276 (Cow)

Gene Details

complement C1q tumor necrosis factor-related protein 1 precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000008228, Cow)

Protein Percentage 94.2%
cDNA percentage 92.15%
Ka/Ks Ratio 0.05481 (Ka = 0.0259, Ks = 0.4725)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 831 bp    Location:231960..226256   Strand:-
>bmy_17062
ATGGGCCCCCGTGGGCTGGGACTCGCGCTGGCGTGCTGCCTGCTGCTGGCCTTCGCCTGTGGCCCGGTGCTGGGCCGCGTGCCCCGTGGGCAGCAGGAGCAGGAGGGGACCAGGGAGCCACCGCTGGACCACGCTGAGAGGGATGAAGAAAAACATGAAAAATACAACTCCAGGCAGGAAGAGGAGCCCCCCGCATCCCGGTGCTTTCGCTGCTGTGACCCTGGTACTCCCATGTACCAGGCCATCCCGGTGCCCCAGATCAACATCACCATTCTGAAAGGTGAGAAGGGCGACCGAGGAGATCGGGGCCTGCAAGGCAAATATGGCAAAACAGGCTCCGTGGGCGCCAGGGGCCACACGGGACCCAAAGGGCAGAAAGGGTCCATGGGGGCCCCCGGGGACCGGTGCAAGAACCACTACGCTGCCTTTTCGGTGGGCCGGAAGAAGCCCCTGCACAGCAACGACTACTACCAGACAGTGATTTTCGACACAGAGTTCGTGAACCTCTACGGCCACTTCAACATGTTCACGGGAAAATTCTACTGCTATGTCCCCGGCATCTACTTCTTCAGCCTCAATGTACACACCTGGAACCAGAAGGAGACATACCTGCACATCATGAAGAACGGGGAGGAGGTGGTGATCCTGTACGCCCAGGTGAGCGACCGCAGCATCATGCAGAGCCAGAGCCTGATGCTGGAGCTGCAGGACCAAGACGAGGTGTGGGTGCGCCTCTTCAAGGGCGAACGCGAAAACGCCATCTTCAGCGATGAGTTTGACACCTACATCACCTTCAGTGGCTACCTGGTCAAGCCCGCCACTGAGCCCTAG

Related Sequences

bmy_17062T0 SequenceType object (3)

Length: 277 aa      View alignments
>bmy_17062T0
MGPRGLGLALACCLLLAFACGPVLGRVPRGQQEQEGTREPPLDHAERDEEKHEKYNSRQEEEPPASRCFRCCDPGTPMYQAIPVPQINITILKGEKGDRGDRGLQGKYGKTGSVGARGHTGPKGQKGSMGAPGDRCKNHYAAFSVGRKKPLHSNDYYQTVIFDTEFVNLYGHFNMFTGKFYCYVPGIYFFSLNVHTWNQKETYLHIMKNGEEVVILYAQVSDRSIMQSQSLMLELQDQDEVWVRLFKGERENAIFSDEFDTYITFSGYLVKPATEP*