Sequence detailsbmy_17064 (Coding sequence)

Part of scaffold_1437 (SequenceType object (1))

For more information consult the page for scaffold_1437 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LGALS3BPENSTTRG00000003662 (Bottlenosed dolphin)

Gene Details

lectin, galactoside-binding, soluble, 3 binding protein

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003433, Bottlenosed dolphin)

Protein Percentage 94.72%
cDNA percentage 96.73%
Ka/Ks Ratio 0.24581 (Ka = 0.0232, Ks = 0.0943)

LGALS3BPENSBTAG00000001368 (Cow)

Gene Details

Galectin-3-binding protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000001802, Cow)

Protein Percentage 83.58%
cDNA percentage 88.87%
Ka/Ks Ratio 0.19421 (Ka = 0.0834, Ks = 0.4294)

LGALS3BP (Minke Whale)

Gene Details

lectin, galactoside-binding, soluble, 3 binding protein

External Links

Gene match (Identifier: BACU011576, Minke Whale)

Protein Percentage 97.36%
cDNA percentage 98.05%
Ka/Ks Ratio 0.21706 (Ka = 0.0127, Ks = 0.0584)

Additional orthologs identified in other species via the OPTIC pipeline.

LGALS3BP (Human)   Lgals3bp (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1593 bp    Location:278642..289440   Strand:+
Raw sequence 
>bmy_17064
ATGCGGCTGGCCGACGGGGACACCGCCAACGAGGGCCGCGTGGAGATCTACTATAGCGGCCAGTGGGGGACGGTGTGTGACAACCTGTGGGACCTGATAGATGCCAGCGTTGTCTGCCGAGCCCTGGGCTTCAAGAATGCCACCGAGGCTCTGGGCGGAGCCACCTTTGGGCCAGGAAGGGGCCCTATCATGCTGGACGAGGTGGAGTGCACAGGGACTGAGCCCTCGCTGGCCAACTGCACATCCCTGGGCTGGATGAAGAGCAACTGTAGACACAACGAGGACGCCGGCGTGATCTGCACCAACGAAACCAGAGGCATCCACACCTTCGACCTGTCCAGCGAGCTCCCCGCAGCTCTAGAGCAGATCTTTGAGAGCCAAAAGGGCTGTGACCTGTTCATCAAGGTGAAGACGAAGGAGGAGGACGAGCTGGGCATCTGTGCCCACAAGCTGATACTGTCCACCAACCCCGAGGCACACGGCCTGTGGAAGGAGCCGAGCAGCAGGGTCACCATGGAGGTGGACACCGAGTGTGTGCCTGTCGTCAGAGACTTTATCAAGTACCTCTACTCCCGGAGGATCGACGTCTCTCTGTCGTCAGTGAAGTGCTTGCACAAGCTCGCCTCTGCCTCCGGGGCCAAGAGGCTGCAGAGCTACTGCGGGCACCTCTTTGCCATCCTCCTCCCCCAGGACCCTTCTTTCCGGACGCCCCTGGACCTCTATGCCTATGCCCTGGCCACCCGGGACCCCGTGCTGGAGGAGATCTGCGTGCAGTTCCTGGCCTGGAACTTCGGGGCCCTGACGCAGGCTGAGGCCTGGCCGAGCGTCCCCAAGGCCCTGCTCCGAGACCTGCTCTCCAGGAGTGAGCTGGTCACGCCCAGCGAGCTGGCCGTGCTGCTGGCCTTGGATGAATGGAGCCAGGARAGGCACATCTCCCACGGGGAGGTGGAGGGCTTGGTGGAGAGGGTGCGGTTCCCCATGATACCGCCCAGGGACCTCTTCACGCTGCAGTTTAACCTGTCCCTGTACTGGAGTCACAAGGCGCTCTTCCAGAAGAAGATGCTGCAGGCCCTGGAGTTCCACACCGTGCCCTTCGAGCTGCTGGCTCAGTACAGGGGCCTGAACCTCACCGAGGACACCTACCAGCCCCGGCTTTACACCTCGCCCACCTGGAGCGCCTCCGTGATGGGTTCCGATTACGACCGCTACCGGTCCTTCCAGACGCCCCAGCACCCCAGCTTCCTCTTCCAGGCCAGCTCAGTCTCCTGGACTTTAGTCTACCTCCCCACCATCCAGAGCTGCTGGAACTACGGGTTCTCGTGCTCCTCTGACGACCCCCCGCTCCTGGCCCTCTCCAAGTCTAGCTACTCCAATCCCACCATCGGTTATGAAAACAAGGCCCTGATGCTCTGTGGGGGGAACTTCGTGGCGGACGTCACCAACTTCGAGGGCTGGAAGGCCCTGATCCCCAGCGCCCTGGGCACCAACAGCTCCAGGAGTGCTTCCTTCTTCCCCTGCCCAGCAGGGTCCTTCAGCAGGTTCCAAGTCGCCATCCGTCCCTTCTACCTGACCAACTCCACGGGTGTGGACTAG

Related Sequences

bmy_17064T0 SequenceType object (3)

Length: 531 aa      View alignments
>bmy_17064T0
MRLADGDTANEGRVEIYYSGQWGTVCDNLWDLIDASVVCRALGFKNATEALGGATFGPGRGPIMLDEVECTGTEPSLANCTSLGWMKSNCRHNEDAGVICTNETRGIHTFDLSSELPAALEQIFESQKGCDLFIKVKTKEEDELGICAHKLILSTNPEAHGLWKEPSSRVTMEVDTECVPVVRDFIKYLYSRRIDVSLSSVKCLHKLASASGAKRLQSYCGHLFAILLPQDPSFRTPLDLYAYALATRDPVLEEICVQFLAWNFGALTQAEAWPSVPKALLRDLLSRSELVTPSELAVLLALDEWSQERHISHGEVEGLVERVRFPMIPPRDLFTLQFNLSLYWSHKALFQKKMLQALEFHTVPFELLAQYRGLNLTEDTYQPRLYTSPTWSASVMGSDYDRYRSFQTPQHPSFLFQASSVSWTLVYLPTIQSCWNYGFSCSSDDPPLLALSKSSYSNPTIGYENKALMLCGGNFVADVTNFEGWKALIPSALGTNSSRSASFFPCPAGSFSRFQVAIRPFYLTNSTGVD*