Sequence detailsbmy_17065 (Coding sequence)

Part of scaffold_1437 (SequenceType object (1))

For more information consult the page for scaffold_1437 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TIMP2ENSTTRG00000003651 (Bottlenosed dolphin)

Gene Details

TIMP metallopeptidase inhibitor 2

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003422, Bottlenosed dolphin)

Protein Percentage 73.51%
cDNA percentage 75.86%
Ka/Ks Ratio 0.19851 (Ka = 0.1439, Ks = 0.7251)

BT.52974ENSBTAG00000010899 (Cow)

Gene Details

metalloproteinase inhibitor 2 precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000014476, Cow)

Protein Percentage 80.11%
cDNA percentage 81.54%
Ka/Ks Ratio 0.19238 (Ka = 0.1447, Ks = 0.752)

Additional orthologs identified in other species via the OPTIC pipeline.

TIMP2 (Human)   Timp2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 573 bp    Location:355534..367046   Strand:+
Raw sequence 
>bmy_17065
ATGGAGTCCGATGCTGTACCCAGGGCTGGGATCATCTTGCCCCTCACCTCCCACCTCCCTGCTGCCCCTTGCCCCCTCCTTAGAGCCAGGACAGTCTTTCAGGGACTCTGCTCACCTCTCTGTCTTTGTTTTGCAGTGATCAGGGCCAAAGCCGTCAGTGAGAAGGAGGTGGACTCTGGGAATGACATCTACGGCAACCCCATCAAGCGGATTCAGTATGAGATCAAGCAAATAAAGATGTTCAAGGGACCTGACAAGGACATAGAGTTTATCTACACGGCCCCCTCCTCCGCAGTGTGCGGGGTCTCGCTGGACATTGGAGGAAAGAAGGAGTATCTCATTGCAGGAAAGGCCGAGGGGAATGGCAAGATGCACATCACCCTCTGTGACTTCATCGTGCCCTGGGACACCCTGAGCACCACCCAGAAGAAGAGCCTGAACCACAGGTACCAGATGGGCTGTGAGTGCAAGGCCAAGTTCTTCGCCTGCATCAAGAGAAGCGACGGCTCCTGTGCATGGTACCGTGGAGCGGCACCCCCCAAGCAGGAGTTTCTGGACATCGAGGACCCGTAA

Related Sequences

bmy_17065T0 SequenceType object (3)

Length: 191 aa      View alignments
>bmy_17065T0
MESDAVPRAGIILPLTSHLPAAPCPLLRARTVFQGLCSPLCLCFAVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDKDIEFIYTAPSSAVCGVSLDIGGKKEYLIAGKAEGNGKMHITLCDFIVPWDTLSTTQKKSLNHRYQMGCECKAKFFACIKRSDGSCAWYRGAAPPKQEFLDIEDP*