Sequence detailsbmy_17066 (Coding sequence)

Part of scaffold_1437 (SequenceType object (1))

For more information consult the page for scaffold_1437 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

USP36ENSTTRG00000003125 (Bottlenosed dolphin)

Gene Details

ubiquitin specific peptidase 36

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002928, Bottlenosed dolphin)

Protein Percentage 83.91%
cDNA percentage 85.27%
Ka/Ks Ratio 0.33854 (Ka = 0.0427, Ks = 0.1262)

USP36ENSBTAG00000021505 (Cow)

Gene Details

Ubiquitin carboxyl-terminal hydrolase

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000028663, Cow)

Protein Percentage 84.74%
cDNA percentage 87.45%
Ka/Ks Ratio 0.23867 (Ka = 0.0835, Ks = 0.35)

USP36 (Minke Whale)

Gene Details

ubiquitin specific peptidase 36

External Links

Gene match (Identifier: BACU011573, Minke Whale)

Protein Percentage 96.22%
cDNA percentage 97.21%
Ka/Ks Ratio 0.3929 (Ka = 0.0207, Ks = 0.0528)

Additional orthologs identified in other species via the OPTIC pipeline.

USP36 (Human)   Usp36 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3039 bp    Location:381425..414557   Strand:+
Raw sequence 
>bmy_17066
ATGCCCATAGTCGACAAGTTGAAGGAAGCCCTCAAGCCTGGCCGCAGGGACTCGGCTGACGATGGGGAGCTGGGGAAGCTTCTGGCCTCCTCTGCCAGGAAGGTCCTTCTGCAGAAGCTGGAGTTTGAGCCGGCCAGCAAGAGTTTCTCGTACCAGCTGGAGTCACTGAAGAGCAAATACGTGCTGCTGAACCCCAGGACAGAGGGAGCCGGCTGCCACAGGAGCGGGGATGAGCCACAGGCCAGGACACAGGGCAGCGAGCACGCGTACGAGAGCTGCGGTGACGGCGTCCCCGCGCCCCAGAAGGTGCTCTTCCCCGTGGAGCGGCTGTCGCTGCGCTGGGGGCGCGTCTACCGTGTGGGCGCGGGGCTGCACAACCTCGGCAACACCTGCTTCCTCAACTCCACCGTGCAGTGCTTGACCTACACGCCGCCCCTGGCCAACTACCTGCTCTCCAAGGAGCACACGCGAGGCTGTCACCAGGGAAGCTTCTGCATGCTGTGTGTCATGCAGAACCACATCATCCAGGCCTTCGCCAACAGTGGCAACGCCATCAAGCCCGTGTCCTTCATCCGAGACCTCAGAAAGATCGCCCGGCATTTCCGCTTCGGGAACCAAGAGGATGCACACGAGTTTCTGCGGTACACCATTGACGCCATGCAGAAGGCCTGCTTGAGCGGCTGTGCCAAGTTGGATCGTCAGACGCAGGCTACGACTTTGGTCCATCAGATTTTTGGAGGCTATCTCCGATCGCGAGTGAAGTGCTCCGTGTGCAAGAGCGTCTCAGACACCTACGATCCCTACTTGGATGTGGCGCTGGAGATTCGGCAAGCTGCAAATATCGTGCGTGCCCTGGAACTTTTTGTGAAACCAGATGTCCTGAGTGGAGAGAACGCCTATATGTGTGCGAATTTCAGTAAAGCCTCTGCAGCTTTAGTGAGACACTCCCTGACTTTGTTCTATTCCTTTGACAGGATTCCAGGCTCTAAGAAGAGTCCTGAGGGCTCCATCTGCAGGACAACGTCCTCCCTTCCCGGCCACCCCAGGGTGGTTCCAGACCACGCCAGGAAGAATATCAGCAATGGGACCACATCCCCATCAGTGACTGGAAAGAGACCAGACCCTGTGACAATGAAGAAGCCGCAGACCCCTGAAGAGCTCGGGGTGCCCGTTGCCAGGAATGGCTCTGTGTCGGGACTGAAGTCTCAGAATGGATACACTCCTCCCAAGCCACCCCTGGGGTCCCCTTCCCCCAAACTCTGCAAAACGCCTACCCACGCGCCARCCGTTCTGGATGAGCCTGGAAAGAAAGTCAAGAAACCAGCTCCCCTGCAGCACTTCTCCCCACCGCTCAAAACCTCCCCGGGGACCCCCGGCACTGGCGAGCCAGGCGGCAGCAGGTGTGAGGGCCGCAGGCCCGGCTCCTGGGACGGCAGGGCCACCCTCTCTACCTCACCTCGGCCCCCGGCCGCCAGGACCGCCAACGGGCTCGGGCCCAAGGTGGGTGATGAGGGCCCCGCCGCCGAGAGGAGAGGCTCCAGCCCTGAGCACCCTGCTGGCGGTGGCCCCACCAGGCCCCCCCAGGCCCCCCAGAGTGGAGCCGCCCCTCTTAGCGATTCTCAGGGAACCCACTCTGCCGGCCCCGCCAAGGTGCTGCCGGCCCGAGAGGACGCTGAGCTGGTGAAGGCCAAGTGCCCCGACCTGAGCAGCGCCGCCCCCGAGCCTGCCAACGCCATGTCTCCTCCGCCGGCCAAAAAGTTGGCCCTTTCTGCCAGGAAGGCCAGCACCCTGCGGAGGGCAACCGGCAATGACCTCCGTCCACCTCCCCTCTCTCCATCCTCCGACCTCACCTCCCCCCGGAAACCCACTCACCCCGTCGTCGCCTCCACCTGGCCTGTCAGTACAATCCGGGCTGTGTCACCTGCTCCCAGACCATCCAGCCATCTGAAGCCCCCCCTTGGCCCCCACGCCCCGTCACTGTCCAGTAGCCCCCCACCTCTCGGGACATCAGACCCACAGAGCCACTCGCCCGCCTCTGCGCCCCTGCCTCAGGTCAACGGGGGCTTCCGGGCCCCCTCACACCAGCTGCCAGAGGCCAGCGAGCCCCCCCAGGGTCTCTGTAAGAAGAGGAAGAAGACCCGCGTGGGAGAGACCCAGGGCCAGGGCTCAGAGACCTGCACGGCTGTGGCGGCCCCTCCAGGGCCTCCTAGGAAGAGGAGGAGGAGGAAGAGGAAGCACACGGGGGACACGGACACCTCCCCTCTGCAGGCGGGGCGCACGCCGGGGCCGCCCTGGAGCCCTGCGCACAGGAAGGAGGGTCGGGCGGAGCCGCCGGCGGGCAGACCGGAGGAAGAGGGCGGACAGCAGCCAGGGAACGGCTGGCCCGTAGGATGCGGGAGCGACGGCCACCGCGTGAGCCGCAGGAAGAGGAGGAGGAAGGGAGCTGAGGGCCTTGGTGGAGAAGACTGCCTCCGCCGGGACCCACCTCGGCATGGGAGCTGCTCTTCTTCAGATGTCGTCCAGCCAGAGACCATTGCAGCATCACCAAGGAAAAAGAAAAAGAAAAAAAGGAAGCGGGAGTCACAACAGGAAGTAGAAGAGAATGAGCCTGAGGGCCAGAGAGGCTCTGTAGTCCCTGGGAGCAGGCCAGGGACAGCTGTGAATGGCCAGGCTCCCGGAGGCCCCACAGGGCTGGGACAGGCTCCTCTTGTATCCTGGGACAGAGAGAGAGAATCCGATGTGGTCCAGGAATTGCTCAAATATTCATCTGATAAAGCTTACGGGAGAAGAGTTTTGACGTGGGACGGCGAGGTGTCAGCTGTCAGTCAGGACGCCATTCAGGACAGCAGGCTGGCCCGCATGGCCACAGTCATTGACGACTGGGACGAAGAGTTCGACCGAGGGAAGGAAAAGAAATTGAAAAAATTCAAGAGAGAGAAGAAAAGAAACTTAAACGCCTTCCAGAAACTTCAGAGTAGACGGAACTTTTGGTCTGTGACTCATCCAGCTAAGGYTTCCAGTCTCAGCTATCGCCGCTGA

Related Sequences

bmy_17066T0 SequenceType object (3)

Length: 1013 aa      View alignments
>bmy_17066T0
MPIVDKLKEALKPGRRDSADDGELGKLLASSARKVLLQKLEFEPASKSFSYQLESLKSKYVLLNPRTEGAGCHRSGDEPQARTQGSEHAYESCGDGVPAPQKVLFPVERLSLRWGRVYRVGAGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHTRGCHQGSFCMLCVMQNHIIQAFANSGNAIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIDAMQKACLSGCAKLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFVKPDVLSGENAYMCANFSKASAALVRHSLTLFYSFDRIPGSKKSPEGSICRTTSSLPGHPRVVPDHARKNISNGTTSPSVTGKRPDPVTMKKPQTPEELGVPVARNGSVSGLKSQNGYTPPKPPLGSPSPKLCKTPTHAPXVLDEPGKKVKKPAPLQHFSPPLKTSPGTPGTGEPGGSRCEGRRPGSWDGRATLSTSPRPPAARTANGLGPKVGDEGPAAERRGSSPEHPAGGGPTRPPQAPQSGAAPLSDSQGTHSAGPAKVLPAREDAELVKAKCPDLSSAAPEPANAMSPPPAKKLALSARKASTLRRATGNDLRPPPLSPSSDLTSPRKPTHPVVASTWPVSTIRAVSPAPRPSSHLKPPLGPHAPSLSSSPPPLGTSDPQSHSPASAPLPQVNGGFRAPSHQLPEASEPPQGLCKKRKKTRVGETQGQGSETCTAVAAPPGPPRKRRRRKRKHTGDTDTSPLQAGRTPGPPWSPAHRKEGRAEPPAGRPEEEGGQQPGNGWPVGCGSDGHRVSRRKRRRKGAEGLGGEDCLRRDPPRHGSCSSSDVVQPETIAASPRKKKKKKRKRESQQEVEENEPEGQRGSVVPGSRPGTAVNGQAPGGPTGLGQAPLVSWDRERESDVVQELLKYSSDKAYGRRVLTWDGEVSAVSQDAIQDSRLARMATVIDDWDEEFDRGKEKKLKKFKREKKRNLNAFQKLQSRRNFWSVTHPAKXSSLSYRR*