Part of scaffold_1452 (Scaffold)

For more information consult the page for scaffold_1452 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PLXNA1 ENSTTRG00000002382 (Bottlenosed dolphin)

Gene Details

plexin A1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002232, Bottlenosed dolphin)

Protein Percentage 88.94%
cDNA percentage 88.04%
Ka/Ks Ratio 0.03055 (Ka = 0.0071, Ks = 0.2312)

PLXNA1 ENSBTAG00000009159 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000030566, Cow)

Protein Percentage 95.64%
cDNA percentage 92.1%
Ka/Ks Ratio 0.02214 (Ka = 0.0216, Ks = 0.9753)

PLXNA1  (Minke Whale)

Gene Details

plexin A1

External Links

Gene match (Identifier: BACU009846, Minke Whale)

Protein Percentage 94.88%
cDNA percentage 95.55%
Ka/Ks Ratio 0.15417 (Ka = 0.0295, Ks = 0.1913)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 5433 bp    Location:15668..54576   Strand:+
>bmy_17082
ATGCGCATCCCTGCAGGACCTGAGTGCCGCAGCCCGAGGCCGCAGCCCGTCATGCTGCTGCCACATCTGAGCCCACGGGCGCTGCTGCCGCCACTGCTTTTGCTGCTGCTGCTGCTGGGGGCCGCGCCCCGGGCGGGTGGGGGTCCACAGCCCCCTTTCCGCACCTTCACGGCCAGTGACTGGGCCCTCACCCACCTGGTGGTCCACGAGCAGACGGGCGAGGTGTACGTGGGCGCCGTGAACCGCATCTACAAGCTGTCGGGGAACCTGACACTGCTGCGGGCGCACGTGACGGGCCCCGTGGAGGACAATGAGAAGTGCTACCCGCCGCCCAGCGTGCAGTCCTGCCCGCACGGCTTGGGCAGCACCGACAACGTCAATAAGCTGTTGCTCCTGGACCAGGCCGCCAACCGCCTGCTGGCCTGTGGCAGCGCCTCGCAGGGCATCTGCCAGTTCCTGCGGCTGGACGACCTCTTCAAGCTGGGCGAGCCCCACCACCGCAAGGAGCACTACCTGTCGGGCGTGCGCGAGGCGGGCAGCATGGCGGGCGTGCTGATCGCCGGGCCTCCCGGCCAGGCGCAGGCCAAGCTCTTCGTGGGCACGCCCATCGACGGCAAGTCCGAGTACTTCCCCACGCTGTCCAGCCGCCGGCTCATGGCCAACGAGGAGGATGCCGAGATGTTCGGTTTCGTGTACCAGGACGAGTTCGTGTCCTCGCAGCTGAAGATCCCCTCGGACACGCTGTCCAAGTTCCCGGCCTTCGACATCTACTACGTGTACAGCTTCCGCAGCGAGCACTTCGTCTACTACCTTACCCTGCAGCTGGACACGCAGCTGACCTCGCCCGACGCCGCCGGCGAGCACTTCTTCACGTCCAAGATCGTGCGGCTGTGCGTGGACGACCCCAAGTTCTACTCCTACGTCGAGTTCCCCATCGGCTGCGAGCAGGCGGGCGTGGAGTACCGCCTGGTGCAGGACGCCTACCTGAGTCGGCCTGGCCGCGCCCTGGCCCGCCAGCTGGGCCTGGCCGAGGACGAGGAGGTGCTGTTCACCGTGTTCGCCCAGGGCCAGAAGAACCGCGTGAAGCCGCCCCGGGAGTCGGTGCTGTGCCTCTTCACGCTCAGGGCCATCAAGGAAAAGATCAAGGAGCGCATCCAGTCCTGCTACCGCGGCGAGGGCAAGCTCTCGCTGCCCTGGCTGCTCAACAAGGAGCTGGGCTGCATCAACTCGCCTCTCCAGATCGACGACGACTTCTGCGGGCAGGACTTCAACCAGCCGCTGGGCGGCACGGTCACCATCGAGGGGACGCCCCTGTTCGTGGACAAGGACGACGGTCTGACCGCTGTGGCCGCCTACGACTACCGGGGCCGCACCGTGGTGTTCGTGGGCACACGCAGCGGCCGCATCCGCAAGATCCTGGTGGACCTGGCGAACCCCGGCGGCCGGCCGGCCCTGGCCTACGAGAGCGTGGTGGCCCAAGAGGGCAGCCCCATCCTGCGTGACCTGGTCCTCAGCCCCGACCGCCAGTACCTGTACGCCATGACGGAAAAGCAGGTGACTCGGGTGCCCGTGGAGAGCTGTGTGCAGTACAGGTCGTGTGAGCTGTGCCTGGGGTCACGGGACCCCCACTGCGGCTGGTGTGTCCTGCACAGCACCTGCTCCCGCCGGGACGCCTGCGAGCGGGCGGCTGAGCCCCAGCGCTTCGCCGCGGACCTGCTGCAGTGCGTACAGCTGACCGTGCAGCCCCGCAACGTGTCCGTGACCACGTCTCAGGTTCCGCTTGTGCTGCAGGCCTGGAATGTGCCCGACCTCTCGGCCGGCGTCAACTGCTCCTTCGAGGACTTCACCGAGTCCGAGGGCGTCCTGGAGGATGGCCGGATTCACTGCCGCTCCCCCTCTGCGCGGGAGGTGGCGCCCATCACGCGGGGCCAAGGAGACCAGCGGGTGGTCAAGCTCTACCTGAAGTCCAAGGAGACGGGCAAGAAGTTTGCGTCCGTGGACTTCGTCTTCTACAACTGCAGCGTCCACCAGTCCTGCCTGTCCTGCGTCAGCGGCTCCTTCCCCTGCCACTGGTGCAAGTACCGCCACGTGTGCACACACAACGCCGCCGACTGTGCCTTCCTGGAGGGCCGTGTCAACGTGTCTGAGGACTGCCCGCAGATCCTGCCCTCCACCCAGATCTACGTGCCGGTGGGTGTGGTGAAGCCCATCACCCTGGCCGCCCGGAACCTGCCGCAGCCGCAGTCGGGCCAGCGGGGCTATGAGTGCCTGTTCCACCTCCCGGGGGGCCCGGCCCGCGTCGCCGCCCTGCGCTTCAACAGCTCCAGCCTGCAGTGCCAGAACTCCTCGTACTCCTACGAAGGCAACGACGTCAGTGACCTGCCCGTGAACCTGTCCGTGGTGTGGAATGGCCACTTCGTCATCGACAACCCGCAGAACATCCAGGCCCACCTGTACAAGTGCCCGGCCCTGCGGGAGAGCTGCGGTCTCTGCCTCAAGGCCGACCCTCGCTTCGAGTGCGGCTGGTGTGTGGCCGAGCGCCGCTGTTCCCTGCGCCCCCACTGCCCCGCGGACTCGCCCGCTGCCTGGATGCACGCCCGCCACGGCAGCAGCCGCTGCGCCGACCCCAAGATCCTCAAGCTGTCCCCTGAGACGGGCCCGCGGCAGGGAGGCACGCGGCTCACCATCACGGGCGAGAACCTGGGGCTGCGCTTTGAGGACGTGCGGCTGGGCGTGCGCGTGGGCAAGGTGCTGTGCAGCCCCGTGGAGAGCGAGTACATCAGCGCTGAGCAGATCGTCTGCGAGATCGGGGACGCCAGCGCGGTGCGGGCCCACGATGCCTTGGTGGAGGTGTGCGTGCGGGACTGCTCCCCCCACTACCGCGCCCTGTCACCCAAGCGCTTCACCTTTGTGACACCGACCTTCTACCGTGTGAGTCCTGCCCGAGGGCCCCTTTCAGGGGGCACCTGGATCGGCATCGAGGGTAGCCACCTGAACGCAGGCAGCGACGTGGCTGTGAGGAATTCCCGGGAGATCCGATGCCTGACGCCCCCGGGGCAGAGCCCCGGCAGTGCCCCCATCGTCATCAACATCAACCGTGCTCAGCTCACCAACCCCGAGGTCAAATACAACTACACCGAGGACCCCACCATCCTGAGGATCGACCCCGAGTGGAGCATCAACAGCGGAGGAACCCTCCTAACGGTCACGGGCACCAACCTGGCCACCGTCCGCGAACCCCGCATCCGGGCCAAGTACGGAGGCGTCGAGAGGGAGAACAGCTGCCTAGTGTACAACGACACCACCATGGTGTGCCGGGCCCCGTCGGTGGACAACCCTGCCCGCAGCCCGCCCGAGCTGGGCGAGCGGCCCGACGAGCTGGGCTTTGTCATGGACGACGTCCGGGCCTTGCTGGTGCTCAACACCTCGACCTTCCTCTACTACCCGGACCCTGTGCTGGAGCCGCTCAGCCCCACCGGCCTCCTGGAGCTGAAGCCCAGCTCGCCCCTCATCCTCAAGGGCCGCAACCTCCTGCCACCAGCGCCCGGCAACTCCCGGCTCAACTACACCGTGCTCATCGGCTCCACGCCCTGCGCCCTCACCGTGTCGGAGACGCAGCTGCTCTGCGAGTCGCCCAACCTCACCGGGCAGCACAAGGTCACGGTCCGGGCCGGCGGCTTCGAGTTCTCGCCGGGGGTGCTGCAGGTGTACTCGGACAGCCTGCTGACGCTGCCCGCCATCGTGGGCATCGGCGGGGGCGGGGGCCTCCTGCTGCTGGTCATCGTGGCCGTGCTCATCGCCTACAAGCGCAAGTCGCGGGACGCCGACCGCACCCTCAAGCGCCTGCAGCTCCAGATGGACAACCTGGAGTCGCGCGTGGCCCTCGAGTGCAAGGAAGCCTTTGCGGAGCTGCAGACGGACATCCACGAGCTGACCAGCGACCTGGACGGTGCCGGCATCCCGTTCCTCGACTACCGCACGTACGCCATGCGGGTCCTCTTCCCCGGCATCGAGGACCACCCGGTGCTCAAGGAGATGGAGGTGCAGGCTAACGTGGAGAAGTCGCTGACACTGTTCGGGCAGCTGCTGACCAAGAAGCACTTCCTGCTGACCTTCATCCGTACGCTGGAGGCCCAGCGCAGCTTCTCCATGCGGGACCGCGGCAATGTGGCCTCGCTCGTCATGACGGCCCTGCAGGGCGAGATGGAGTACGCCACGGGCGTGCTCAAGCAGCTGCTGTCTGACCTCATCGAGAAGAACCTGGAAAGCAAGAACCACCCGAAGCTGTTGCTGCGGCGGACTGAGTCGGTGGCAGAGAAGATGCTGACCAACTGGTTCACCTTCCTTCTGTACAAATTCCTCAAGGAGTGCGCCGGGGAGCCGCTCTTCMTGCTCTACTGCGCCATCAAGCAGCAGATGGAGAAGGGCCCCATCGACGCCATCACGGGCGAGGCGCGCTACTCCCTGAGCGAGGACAAGCTCATCCGCCAGCAGATCGACTACAAGACGCTGACCCTGAACTGCGTGAACCCCGAGAACGAGAACGCGCCCGAGGTGCCGGTGAAGGGGCTGAACTGCGACACGGTGACGCAGGTCAAGGAGAAGCTGCTGGACGCCGTGTACAAGGGCGTGCCCTACTCCCAGCGGCCCAAGGCCGGGGACATGGACCTGGAGTGGCGCCAGGGCCGCATGGCCCGCATCATCCTGCAGGATGAGGACGTCACCACCAAGATCGATAACGACTGGAAGAGGCTGAACACGCTGGCGCACTACCAGAACCACGACCACCTGGACCAGCGCGAGGGCGACCGTGGCAGCAAGATGGTTTCCGAGATCTACCTGACGCGGCTGCTGGCCACCAAGGGCACGCTGCAGAAGTTTGTGGACGACCTCTTCGAGACCATCTTCAGCACGGCGCACCGGGGCTCGGCCTTGCCGCTGGCCATCAAGTACATGTTCGACTTCCTGGATGAGCAGGCCGACCAGCACCAGATCCACGACGCAGACAACCCGCAGTTCGTGTTCGACATCCACAAGAGCAGCATCACGGACGCCTGCCTGTCGGTGGTGGCCCAGACCTTCATGGACTCCTGCTCCACATCTGAGCACAAGCTGGGGAAGGACTCACCTTCCAACAAGCTGCTCTACGCCAAGGACATCCCCAACTACAAGAGCTGGGTGGAGAGGTACTACGCGGACATCGCCAAGATGCCCGCCATCAGCGACCAGGACATGAGCGCGTACCTGGCTGAGCAGTCGCGGCTGCACCTGAGCCAGTTCAACAGCATGAGTGCCCTGCACGAGATCTACTCCTACATCAGCAAGTACAAGGACGAGATCCTGACGGCCCTGGAGAAGGACGAGCAGGCACGGCGGCAGCGGCTCCGGAGCAAGTTGGAGCAGGTGGTGGACACCATGGCCCTGAGCAGCTGA

Related Sequences

bmy_17082T0 Protein

Length: 1811 aa      View alignments
>bmy_17082T0
MRIPAGPECRSPRPQPVMLLPHLSPRALLPPLLLLLLLLGAAPRAGGGPQPPFRTFTASDWALTHLVVHEQTGEVYVGAVNRIYKLSGNLTLLRAHVTGPVEDNEKCYPPPSVQSCPHGLGSTDNVNKLLLLDQAANRLLACGSASQGICQFLRLDDLFKLGEPHHRKEHYLSGVREAGSMAGVLIAGPPGQAQAKLFVGTPIDGKSEYFPTLSSRRLMANEEDAEMFGFVYQDEFVSSQLKIPSDTLSKFPAFDIYYVYSFRSEHFVYYLTLQLDTQLTSPDAAGEHFFTSKIVRLCVDDPKFYSYVEFPIGCEQAGVEYRLVQDAYLSRPGRALARQLGLAEDEEVLFTVFAQGQKNRVKPPRESVLCLFTLRAIKEKIKERIQSCYRGEGKLSLPWLLNKELGCINSPLQIDDDFCGQDFNQPLGGTVTIEGTPLFVDKDDGLTAVAAYDYRGRTVVFVGTRSGRIRKILVDLANPGGRPALAYESVVAQEGSPILRDLVLSPDRQYLYAMTEKQVTRVPVESCVQYRSCELCLGSRDPHCGWCVLHSTCSRRDACERAAEPQRFAADLLQCVQLTVQPRNVSVTTSQVPLVLQAWNVPDLSAGVNCSFEDFTESEGVLEDGRIHCRSPSAREVAPITRGQGDQRVVKLYLKSKETGKKFASVDFVFYNCSVHQSCLSCVSGSFPCHWCKYRHVCTHNAADCAFLEGRVNVSEDCPQILPSTQIYVPVGVVKPITLAARNLPQPQSGQRGYECLFHLPGGPARVAALRFNSSSLQCQNSSYSYEGNDVSDLPVNLSVVWNGHFVIDNPQNIQAHLYKCPALRESCGLCLKADPRFECGWCVAERRCSLRPHCPADSPAAWMHARHGSSRCADPKILKLSPETGPRQGGTRLTITGENLGLRFEDVRLGVRVGKVLCSPVESEYISAEQIVCEIGDASAVRAHDALVEVCVRDCSPHYRALSPKRFTFVTPTFYRVSPARGPLSGGTWIGIEGSHLNAGSDVAVRNSREIRCLTPPGQSPGSAPIVININRAQLTNPEVKYNYTEDPTILRIDPEWSINSGGTLLTVTGTNLATVREPRIRAKYGGVERENSCLVYNDTTMVCRAPSVDNPARSPPELGERPDELGFVMDDVRALLVLNTSTFLYYPDPVLEPLSPTGLLELKPSSPLILKGRNLLPPAPGNSRLNYTVLIGSTPCALTVSETQLLCESPNLTGQHKVTVRAGGFEFSPGVLQVYSDSLLTLPAIVGIGGGGGLLLLVIVAVLIAYKRKSRDADRTLKRLQLQMDNLESRVALECKEAFAELQTDIHELTSDLDGAGIPFLDYRTYAMRVLFPGIEDHPVLKEMEVQANVEKSLTLFGQLLTKKHFLLTFIRTLEAQRSFSMRDRGNVASLVMTALQGEMEYATGVLKQLLSDLIEKNLESKNHPKLLLRRTESVAEKMLTNWFTFLLYKFLKECAGEPLFXLYCAIKQQMEKGPIDAITGEARYSLSEDKLIRQQIDYKTLTLNCVNPENENAPEVPVKGLNCDTVTQVKEKLLDAVYKGVPYSQRPKAGDMDLEWRQGRMARIILQDEDVTTKIDNDWKRLNTLAHYQNHDHLDQREGDRGSKMVSEIYLTRLLATKGTLQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDEQADQHQIHDADNPQFVFDIHKSSITDACLSVVAQTFMDSCSTSEHKLGKDSPSNKLLYAKDIPNYKSWVERYYADIAKMPAISDQDMSAYLAEQSRLHLSQFNSMSALHEIYSYISKYKDEILTALEKDEQARRQRLRSKLEQVVDTMALSS*